| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3544 |
|---|
| Symbol | |
|---|
| ID | 3739803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3976623 |
|---|
| End bp | 3977537 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637780833 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_386474 |
|---|
| Protein GI | 78224727 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000000876339 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCG ATACCATCAA GCAGGAAATC AGGCGGCTCC TCAAGGAGCG CAACGCCGTC
CTCCTGGCTC ACAACTACAT GCGGGACGAG GTGCAGGAAA TCGCCGACAT CACCGGCGAC
TCCCTGGGGC TCTCCCAAGA GGCGGCCAAA ACCGCTGCGG ACGTGATCGT CTTCTGCGGT
GTTCACTTCA TGGCCGAGTC GGCATCCATC CTCTCGCCCC ATAAGACGGT GCTCCTGCCG
CGGCGCGACG CCGGCTGCCC CATGGCCGAC ATGGTGACGG TGGAGGGACT CCTGGAGCTG
AAGGCCAGGC ATCCGGGCGT GCCGGTTGTC ACCTACGTGA ACTCCTCGGC GGCAGTGAAG
GCCGTGAGCG ACATCTGCTG CACCTCCGCC AACGCCGTGA AGGTGGTCAA CTCCCTCCCG
GACCGGGAGG TGATCTTCGT CCCCGACCGG AACCTGGGCC AGTTCGTGGC GAAGCAGTCG
GACAAGGCCT TCCACTTCTG GGACGGCTAC TGCCCCACCC ACGAGCGGCT CAAGGCCGAC
GTGGTGGCGC GCCTGAAGGC AGAGAATCCC GATGCCCTTT TCATCTGCCA CCCCGAATGC
AACCCGGCGG TGGTGGCCCT GGCCGACCAC GCCTGCTCCA CGAGCGGCAT GTACGATTAC
TGCCGCAAGA GTCCGGCCAA ACGCTTCATC ATCGGCACCG AGGCGGGAAT CCTCTACAAG
CTCCGCCTGG AGAACCCCGA CAAGGAGTTC ATCCTCGCCT CGCCGGCCCT GGTCTGCCCC
AACATGAAGC TCACCTCCCT GGAGGACATC CTCGATGCCC TCACGACCAT GGCGCCGGTG
GTGCAGGTGC CTGAGGATAT CCGGGTGCAA GCCAAGCGGG CACTGGACCG GATGATCGCC
ATACCGAGGG ACTGA
|
|---|
| Protein sequence | MQADTIKQEI RRLLKERNAV LLAHNYMRDE VQEIADITGD SLGLSQEAAK TAADVIVFCG
VHFMAESASI LSPHKTVLLP RRDAGCPMAD MVTVEGLLEL KARHPGVPVV TYVNSSAAVK
AVSDICCTSA NAVKVVNSLP DREVIFVPDR NLGQFVAKQS DKAFHFWDGY CPTHERLKAD
VVARLKAENP DALFICHPEC NPAVVALADH ACSTSGMYDY CRKSPAKRFI IGTEAGILYK
LRLENPDKEF ILASPALVCP NMKLTSLEDI LDALTTMAPV VQVPEDIRVQ AKRALDRMIA
IPRD
|
|---|
| |