Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3540 |
Symbol | |
ID | 3739799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3973146 |
End bp | 3974435 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780829 |
Product | WD-40-like beta propeller repeat-containing protein |
Protein accession | YP_386470 |
Protein GI | 78224723 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000050948 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC GTCTCTTCAT TCTCATCACC ATCATGCTCT GCCTGATCCC CGCACTCCTC CATTCCCAGG AAGGGTATCG GGAAGTGACG GCTGCGGGAA CCCACAAACT GACCCTCACC GTGGACTCCC CACGGCGCCT CGGCGGTTCC GATGCTCCCC AGGTGGCCCG CGAGACGGCC GAAGCGCTCC AGTTCGACAT GGTCCTTGCC GGCCCCTTCA CCGTCACGGC CCCCTCGGCC GCCGCGGCCT CGGCCGGCAT CCGGCCGGGA GAGTTCGACT TCGCCCCCTG GCGCGGCGCC GGGGTCGACC TTCTGGTCAA GAGCGGCTAC ACGGTTACGG GAAACGCCAT GACCATGGAG TTCCGCCTCT ACAACGTCAC CCAGGGGAAG GAGATCCTGG CCAAGCGGTA CACGGGCCGT CCCGGCGATG TCCGGAGAAT CGCCCATACC TTCTCGGACG ACATCATGGC CGCCCTGACC GGGGAGCGTG GCCCCTTCAC GGGAAAAATC GCTTTTGTCT CCACCCGGGC CGGCGCCAAG GCGATCTTCC TCATGGACTA TGACGGTCAC AACGTCCAGC AGCTCACGAA AAACCGCTCC ATCAACCTGA ACCCCGATTT TTCCCCCAGC GGGAAGGAAA TCATCTTCAC CTCCTACCGC CAGGGAAATC CGGACCTCTT CCGCCGCGAG CTCTTCACCG GCGCCGAGGC CCGGATCTCC TCCTACCGGG GGATCAACGC CACCGGCGCC TGGTCCCCCG ACGGCAAGAC CATCGCCCTG ACCCTGAGCA AGGACGGCAA CTCGGAGATC TACACCATCT CCCGGGACGG GAAGAACCCG CACCGGCTCA CCAACACCAG CGCCATCGAG GTCTCCCCCG CCTGGTCCCC CGACGTCCGC AAGATCGTCT TCGTCTCCGA CCGGCTCGGC AAACCCCAGA TTTTCATCAT GAATGCCGAC GGCACCGGGG TCCGGCGCCT CACCACCAGC GGCAACTACA ACGTGAGCCC CCGCTGGTCC CCCAAGGGTG ACCGGATCGT CTACAGCCGC CAGGAGGGAG GGTTCCAGAT CTACGCCATC AACCCCGACG GAACCAACGA TACCAGGCTC ACCAGCGAGG GAAGCAACGA GCATCCCCGG TGGTCTCCCG ACGGCCGTTT CATCACCTTC AGCTCCACCC GCGGCGGCGG TGAAGGGATT TACGTGATGA GGGCCGACGG CAGCGGCCAG ACCCGGGTTT CCGGCGGGAA GGGGAGGGAC TCCCATCCCA CGTGGTCGCC GCGTTGGTGA
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Protein sequence | MTRRLFILIT IMLCLIPALL HSQEGYREVT AAGTHKLTLT VDSPRRLGGS DAPQVARETA EALQFDMVLA GPFTVTAPSA AAASAGIRPG EFDFAPWRGA GVDLLVKSGY TVTGNAMTME FRLYNVTQGK EILAKRYTGR PGDVRRIAHT FSDDIMAALT GERGPFTGKI AFVSTRAGAK AIFLMDYDGH NVQQLTKNRS INLNPDFSPS GKEIIFTSYR QGNPDLFRRE LFTGAEARIS SYRGINATGA WSPDGKTIAL TLSKDGNSEI YTISRDGKNP HRLTNTSAIE VSPAWSPDVR KIVFVSDRLG KPQIFIMNAD GTGVRRLTTS GNYNVSPRWS PKGDRIVYSR QEGGFQIYAI NPDGTNDTRL TSEGSNEHPR WSPDGRFITF SSTRGGGEGI YVMRADGSGQ TRVSGGKGRD SHPTWSPRW
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