Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3518 |
Symbol | |
ID | 3739059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3952050 |
End bp | 3952532 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780804 |
Product | cytochrome c family protein |
Protein accession | YP_386448 |
Protein GI | 78224701 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000000121286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAAGTC ATGTCTGGCG CCCCCTGTTC GTGGCTCTCG GTCTCGTCAT CCTCATCCTC GTTGCCAGGG TCTTCGTGGT TCCCGCGGAT TTCGGCATCG GAGAGCGGGG CTACATGTAC GGCTGGCACC GCAAGGGAAA CGAGGAGGAG TGGAAGAAGG TCACGGTCAA GTACAAGACC AAGGCATACT GCAAGGAATG CCACGGGGAA AAGGTGGAGA GCATCGGCCG CTCCCCCCAC GGTGTCCTGC AGTGTGAAAA CTGCCACGGG CCGGCCCTGG ACCACCCGAA AGACCCGCCG ACTCTCACCA TCGACCACAG CCGCAAGCTC TGCATCCGGT GCCACGCCAA GCTCGACACA CCATCCAGCG GCAGGTCGAA GATCCGCGGC ATCGATCCCG AGACCCACAA TCCCGAGGCC GAATGCAGCC TCTGCCACGA CCCCCACCAC CCGAACCTGG AGGAGCTGAA ACGCCATGAA TAG
|
Protein sequence | MKSHVWRPLF VALGLVILIL VARVFVVPAD FGIGERGYMY GWHRKGNEEE WKKVTVKYKT KAYCKECHGE KVESIGRSPH GVLQCENCHG PALDHPKDPP TLTIDHSRKL CIRCHAKLDT PSSGRSKIRG IDPETHNPEA ECSLCHDPHH PNLEELKRHE
|
| |