| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3508 |
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| Symbol | |
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| ID | 3739049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3938179 |
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| End bp | 3939453 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780794 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_386438 |
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| Protein GI | 78224691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGGA AAAACGGAAT CATAATCGGC ATCATCCTGG CCATGGCCGT CGGCGGTGCC
TTTGTCTATC GCTCTACCCA TGTGAAAGGG GGCGCCGGCG AGCACGCCGA AACGAAGGAG
GCCGGCCATA CGGATGAAAA GGGAGGCCAC GAAGAGGGGA AGCACGAGGG AGAGAAGGAA
GGTCATGAAG GCCATGATGA GCATGGGGAA GAAGGGACGA TCAAGATGAC CGCCGAGGTG
CAGAAGCAGA ACGGCGTGGC CGTTGCTCCG GCCCAAAAAC AGCGGCTCGC CGGCGCGATC
AGCGCCACCG GCAAGGTGGA GGCCAATGCC GACCGGATCG CCCATGTCTC GCCGCGCATC
TCCGGCAAGA TCGTCAGCGT CCGGGCCTCC CTCGGAGACG GCGTCGCCGC CGGGCAGCCC
CTGGTGACCC TGGACAGCGT CGAACTGGGT GAGGCCCTGA ACCGCTACCA CCAGTCAAAG
ACACGGCTCG CCCTGGCCCA GTCCAATATG GACCGGATCA AGGCGCTGGT GGAGAAGAAG
ATTGCAGCCC GCAAGGACAT CCTCCAGGCG GAGACCGACT ACAAGATGGC GCAGACGGAA
CTCCATACCG ATGAAGAACG CCTCTCCCTC TATGGCGTTT CAACCTCTGA CCTCGGAAAG
GCAAACCACC GGAAGCCGCT CCTGCCGGTC CGCTCCCCCA TCGGCGGCAT CATCACCGAA
AAACACGCCA TCGTCGGCGA GCTGGCCGAC CCATCCAAGA GCCTCTACAC CGTGGCTGAC
CTTTCGTCGG TCTGGGTGAT GGTGGACATC AACGAAAAAG ATCTGGTCAA GATTCACCGG
GGGCAGACTG CCGCCGTCAC CGTCAGCGCC TTTCCCGACC TGAAACTGAA GGGGCGGATC
ACCTACATCG CCGACCTGGT TGACGAATCA ACCCGCACGG TCAAGGCCCG GGTCGAGGTG
GCCAATCCGG GGCGGAAGCT GAAGCCGGAG ATGTTCGCCA CTATTGAGTT GACGCTGGCG
GCCGACGCGC CGCCGGTCCT GGCCGTCCCC GAGGATGCCC TGCAGGACCT GGACGGGAAA
AAGGTGCTCT TCATCGCGGA GAAGGACTCC GAATTCGCTG CCCGTCCCGT GCAGACCGGC
CGGGCGGCCG GCGGTCTGGT GGAGATCGTT TCCGGTCTGA AGGAGGGTGA GAACTACGCC
GTCAAGGGCT CGTTCATCCT CAAGTCGGAG ATCAAGAAGG GTGAGATGAC CGACGAGCAC
GGCCACGGCA AATGA
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| Protein sequence | MNRKNGIIIG IILAMAVGGA FVYRSTHVKG GAGEHAETKE AGHTDEKGGH EEGKHEGEKE
GHEGHDEHGE EGTIKMTAEV QKQNGVAVAP AQKQRLAGAI SATGKVEANA DRIAHVSPRI
SGKIVSVRAS LGDGVAAGQP LVTLDSVELG EALNRYHQSK TRLALAQSNM DRIKALVEKK
IAARKDILQA ETDYKMAQTE LHTDEERLSL YGVSTSDLGK ANHRKPLLPV RSPIGGIITE
KHAIVGELAD PSKSLYTVAD LSSVWVMVDI NEKDLVKIHR GQTAAVTVSA FPDLKLKGRI
TYIADLVDES TRTVKARVEV ANPGRKLKPE MFATIELTLA ADAPPVLAVP EDALQDLDGK
KVLFIAEKDS EFAARPVQTG RAAGGLVEIV SGLKEGENYA VKGSFILKSE IKKGEMTDEH
GHGK
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