Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3499 |
Symbol | |
ID | 3739040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3929493 |
End bp | 3930077 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637780785 |
Product | OmpA/MotB |
Protein accession | YP_386429 |
Protein GI | 78224682 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA TGTTGTGTCG TGTCACAATG TTAAGCATCG GAATCCTTGC GGTGGCAGGT TGTGCCAAAA ACGAGACGAT AAAGAAAGAT GAGATGGTCC CGGTCGCATC AAACAAGACT GCTCAAGCGG CCGTTGCCAA GCCGGCAGTA AAGGATGGGG GAATCAAGAC TCCGCCGGCC AAGGAGGTTC AGTCCAAAGA CCAGTCCAAG GAAGGTGCCG CAAAGGGCAC TATGACAGAA GCTCAACTGC AGGCTGCCCT TACCAAGATT TTCTTTAATT TCGACTCGTC CGTGCTTTCT TCGGAAGGGC GGGAAACACT GGTCAAGAAC GCCGAGTTGT TAAAGAGTGC CAGTTTCAAG GTGCGGATAG AAGGGAACTG CGACGAGCGG GGTTCTGACG AGTACAATCT TGCCCTTGGG GAGAGGAGGG CACAGGCAGC AATGAAATAC CTGCTTACCA TGGGTGTGCC GGCCGATCGC CTCTCCATCA TCAGTTACGG AGAGGAAAAA CCCGCTGATC CGGGACACGA CGAAGCAGCC TGGGCAAAAA ACAGGCGGGA TGAATTCGTC GTAATGGTCA AGTAA
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Protein sequence | MRKMLCRVTM LSIGILAVAG CAKNETIKKD EMVPVASNKT AQAAVAKPAV KDGGIKTPPA KEVQSKDQSK EGAAKGTMTE AQLQAALTKI FFNFDSSVLS SEGRETLVKN AELLKSASFK VRIEGNCDER GSDEYNLALG ERRAQAAMKY LLTMGVPADR LSIISYGEEK PADPGHDEAA WAKNRRDEFV VMVK
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