| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3478 |
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| Symbol | |
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| ID | 3739191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3904534 |
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| End bp | 3907599 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637780766 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_386411 |
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| Protein GI | 78224664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGACCAGGAT GAGCGTTATC GCCTGTTGCC TTGTGGCGGG CTTTCTCGTG
CTGACGGCTG TTCCTGCCTA CATCTACATT TCCAGCGAGC TAAAGAGGCA GATCTCCAGC
GAGCAGTTCG CATTGGCCAG GTATATGGCT GCCCATTTCG ACGACAATGT CGACATGGCG
AGGGAGAAGA TCGCAAAGTG CGCGGCAGCC CTCAATCCCG CTGAAGTGAA CGATCCGGCC
GGTCTTCGGG AATTTCTGGA GTTCGAGCAG GAACTCCAGA CATTTTTCGA CCAAGGGATG
TATGTGATCC GTCTTGACGG CACCCTGGTC GCGGCCACCT CCCGGGATGC TGCCCTGAGG
AAAATATCTC CCGACGAAAT TGATCTCCTC GTGAGGGGAA AAGCCGTGTC GAATGCCTGT
GCTTCGCCCC ACGGGCCGAT CCCCTGCCTG ACAGTGGCCG CTCCCATCCG TGACCGTTCC
GGAAGCCTGG TCGCGGTGCT GGCGGGACGG CTCGATGTCA CCAAAAAGCA TTTTCTCGGC
GAGCTTACCG CTTTGAAGGT GGGGAGCGAC GGATACGCGT ACGTTATCGA TTCCCGCCGT
ACTCTCATCA TGCATACGGA CCGGATCCGG ATCCTGGAAA CACTGCACGT CGGCGCCAAC
GAGGGAATCG AAAAGGCCCT CCATGGCTTC GAGGGAACCG TGGAGAACAC CAACGCAAGC
GGCGTGCGCG GCCTCACATC GTTCAAGCGA CTTTCCTCGG CCGGCTGGAT TCTCGCGGTT
CATCTTCCCC TCCAGGAGGC GTATGACTCC CTCTACCGTG TCCGGTTCTA CTTCGGGATC
ATGTTGGCGG CCGCCATGTT TTGTTCCGCG ATGGTTGTCT GGTTCGTAAT GGGAAGGGTT
GTGGCCCCCC TCCTTTCCCT GACCCGGCAC GTGAGGGACA TGGCCGAAAA GAACGGAGCG
GACAGGCTGG TACGCGTCGA TACCCCCGAC GAGATTGGCG ATCTGGCCCG GGCGTTCAAT
GGCATGGTCC GGAAGATCGA GCAGCAGCGG GGGGAACTGG AGCGGGCCAA GGATTTTCAC
CTCTTACTCT TTGAAGAGTT TCCCACCCTC ATTTGGCGGA TGGGCCTCGA CGGACGGTGC
AACTACCTGA ACCGGACATG GTTCGAGTTT ACCGGTAGGA GATCCGCCGA AGCTCTCGGA
GACGGCTGGC TCGAAGATAT CCATCCCGAC GACCGCCCGG AGGTTGAGCA CTGCTTTGCG
AAGGCATTCG CCGCCCGTAG CGCCTATGTC ATGGAATACA GACTTCTCCA CCGCAACGGA
GAATTCCGCT GGATCGAGGA CAATGGCAGA CCTTTCAATG ATCTAGACGG CAACTTTGCC
GGATACATCG GTTTCTCCCT CGACATAACC GAACGGATGA GAGCGGTAGA GGCGCTAAGG
GAGTCGGAGC GCTTTGCCCG TTCCACGGTC GATGCCCTGT CGAGCCATAT CGCCATTCTG
GACGCCACGG GAACCATTGT TGCAGTCAAC AAAGCGTGGC GGGAGTTCGT CCTGGCCAAT
CCACCTCTGT CAAACAATGT GAACGAAGGA GCCAATTATC TGGCTGTCTG CGATGCGGCG
GTCGGTGAGG ATGCCGAGAC GGCGCAATCC TTTGCCCAAG GGATACGGAA CGTGCTGGAG
GGGAAAGCTG CCGTTTTTTC CCGGGAATAT TCCTGCCATT CCCCCGAAGA GAAATGTTGG
TTTGTCGGGC GCGTCACCCG CTTTTCGGGA GATGGTCCAC CCCTCGTGGT TGTTGCCCAT
GAAAACGTGA CGGTCCGGAA GCTGGCGGAG GAGGAGCTGG CCAGAAGTCG GGAGGAGCTT
GTCGCGAAGC ACAAGGAGCT CAAAAGTGCC TTTCTCCAGG TGGCTCAAGG AAAGAAAGAG
TGGGAGCTCA CCCTTGATTG TATCGGTGAC TTGGTCATCA TGGCGGATGC CGCCGGTCGG
GTCAGGCGGT GTAACCGCGC CGTGACCGAG CTTGCCCGCA AGCCCGTGGA CGAGCTGATT
GGCCGACCGT GGCCCGAGGT TGTTATTCTT CCTGAGGTGG AAACCGATAG TTACGCGAAC
GGGGGAGGTG AAATACACCA CAGGGAAACA AATCGGTGGT TCTTGCTCAC CTCTTATCCG
TTCACCGGCA CTGGAACGGA GAAGGGCGCT GTCATTACGC TCCATGACGT GACCGAGGCC
AAGCGGTCTG CCCTTGAACT GGAGCAGGCC AACACCGAGC TGAAGGAAAC CCAGTCCCAG
ATGCTCCAGA GGGAGAAAAT GGCTTCCATC GGCCAGTTGG CGGCCGGCGT GGCCCACGAG
ATCAACAATC CCATGGGGTT CATTACCAGC AACCTGGGAA CGCTGCGCAA GTATGGGGAC
AAGTTGTTGG AATTCATGGC GTTTATTGCA GAGAAAGCGG AAAGTCACCT TGATCTGCGG
AAGGAAATCG AGGCTGAGCG GCGAAGGCTC AAAATCGACT ACGTGGCCGA CGATCTGGAG
AACCTCATCA CTGAGTCATT GGAGGGGGCC GAGAGGGTCA GAAAGATTGT TGCCGATCTC
AAGAGTTTTT CCCGGGTCGA CGAGGCTGAA TACAAGGTGG TTGACTTGAC CGAGTGTCTC
GACAGCACCA TCAACATCGT CTGGAACGAG CTGAAGTACA AGGCAACCCT GAAAAAGGAG
TACGGAGAAC TGCCGCCGCT CCGCTGCTAC CCCCAGCAGC TTAACCAGGT CTTCATGAAT
CTGCTCGTAA ATGCGGCCCA CGCCATCGAA ACCCAGGGAG AGATCACCGT CCGGACCAGG
TCGAAAGAGG GGTGGGTCAG CATCGCCATC GAGGATAACG GCTGCGGGAT TCCCGACGAT
GTCATGGCGA GGATCTTCGA GCCGTTTTTT ACCACCAAAG AGGTCGGAAG GGGGACGGGG
CTCGGGCTCT CCATCAGCTA CGACATAGTG AAGAAGCACG GCGGTGAGAT CACTGTGACC
AGCGAACAGG GGAAGGGAAC CACCTTCGTC GTCCGTCTGC CGTCATGCGC TGCTGGCCAG
GGGTAG
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| Protein sequence | MSIKTRMSVI ACCLVAGFLV LTAVPAYIYI SSELKRQISS EQFALARYMA AHFDDNVDMA
REKIAKCAAA LNPAEVNDPA GLREFLEFEQ ELQTFFDQGM YVIRLDGTLV AATSRDAALR
KISPDEIDLL VRGKAVSNAC ASPHGPIPCL TVAAPIRDRS GSLVAVLAGR LDVTKKHFLG
ELTALKVGSD GYAYVIDSRR TLIMHTDRIR ILETLHVGAN EGIEKALHGF EGTVENTNAS
GVRGLTSFKR LSSAGWILAV HLPLQEAYDS LYRVRFYFGI MLAAAMFCSA MVVWFVMGRV
VAPLLSLTRH VRDMAEKNGA DRLVRVDTPD EIGDLARAFN GMVRKIEQQR GELERAKDFH
LLLFEEFPTL IWRMGLDGRC NYLNRTWFEF TGRRSAEALG DGWLEDIHPD DRPEVEHCFA
KAFAARSAYV MEYRLLHRNG EFRWIEDNGR PFNDLDGNFA GYIGFSLDIT ERMRAVEALR
ESERFARSTV DALSSHIAIL DATGTIVAVN KAWREFVLAN PPLSNNVNEG ANYLAVCDAA
VGEDAETAQS FAQGIRNVLE GKAAVFSREY SCHSPEEKCW FVGRVTRFSG DGPPLVVVAH
ENVTVRKLAE EELARSREEL VAKHKELKSA FLQVAQGKKE WELTLDCIGD LVIMADAAGR
VRRCNRAVTE LARKPVDELI GRPWPEVVIL PEVETDSYAN GGGEIHHRET NRWFLLTSYP
FTGTGTEKGA VITLHDVTEA KRSALELEQA NTELKETQSQ MLQREKMASI GQLAAGVAHE
INNPMGFITS NLGTLRKYGD KLLEFMAFIA EKAESHLDLR KEIEAERRRL KIDYVADDLE
NLITESLEGA ERVRKIVADL KSFSRVDEAE YKVVDLTECL DSTINIVWNE LKYKATLKKE
YGELPPLRCY PQQLNQVFMN LLVNAAHAIE TQGEITVRTR SKEGWVSIAI EDNGCGIPDD
VMARIFEPFF TTKEVGRGTG LGLSISYDIV KKHGGEITVT SEQGKGTTFV VRLPSCAAGQ
G
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