Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3469 |
Symbol | |
ID | 3739182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3887532 |
End bp | 3890870 |
Gene Length | 3339 bp |
Protein Length | 1112 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780758 |
Product | trehalose synthase/ maltokinase-like |
Protein accession | YP_386403 |
Protein GI | 78224656 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA GAGAACCGTT GCGGGGCGGC AATCCCCTCT GGTACCGGGA CGCCATTATC TACCAGCTCC ACGTCAAGGC CTTCGCCGAC TCGGACGGCG ACGGCATGGG GGACTTCCGG GGCCTCATGG GGAAGCTCGA CTATCTCCAA TCCCTGGGGA TCACCGCCAT CTGGATCCTC CCCTTCTACC CTTCGCCGCT ACGGGATGAC GGGTACGACA TCGCCGACTA TTACAGCGTG AACCCCAGCT ACAACACCCT GCGGGAATTC CGGGAGTTCC TCCGGGCGGC ACACGCCCGC CGCATCCGGG TCATCACTGA GCTGGTCCTC AACCACACCT CGGACCAGCA CCCCTGGTTC CAGCGGGCCC GCCGGGCCAA ACCGGGATCG GCCCACCGCG ACTACTACGT CTGGAGTGAC AACCCCGACC GCTACCAAGG AACCCGGATC ATCTTCCAGG ACTTCGAAAC CTCCAACTGG AGCTGGGATC CGGTGGCCAA GGCCTACTAC TGGCACCGGT TCTACTCCCA CCAGCCCGAT CTCAACTACG ACAACCCCAA GGTCCAGGCG GAGATGCTCC GGGTCATCGA CTACTGGCTC GGGATGGGAG TGGACGGGGT GCGCCTCGAC GCGGTCCCCT ACCTCTTCGA GCGCGAGGGG ACCAACTGCG AGAACCTCCC CGAAACCCAC GCCTTCCTGA AGAAGCTCCG GGCCCACGTG GACGCCTCGT TCCCCAACCG GATGCTCCTC GGCGAGGCCA ACCAGTGGCC CGAAGACGCC ATCGCCTACT TCGGCGAGGG GGACGAGTGC AACATGCTCT TCCACTTCCC CCTCATGCCC CGTATGTACA TGGCCATCGA AATGGAGGAC CGCTTCCCCG TAATCGACAT CATCGACCAG ACCCCCGCCA TCCCCGAGGG GTGCCAGTGG GCCATCTTCC TCCGCAACCA CGACGAGCTG ACCCTGGAGA TGGTCACCGA CGAAGAGCGG GACTACATGT ACCGGATCTA CGCCGCCGAC CCGAAAGCGC GGATCAACCT GGGGATCCGG CGGCGCCTCG CTCCGCTCAT GGAGCGGGAC CGGCGGAAGA TCGAGCTGAT GAACGCCCTT CTCTTCTCGC TCCCCGGCAC CCCCATCATC TACTACGGCG ACGAGATCGG CATGGGGGAC AACTACTACC TGGGGGACCG CAACGGCGTC CGCACCCCCA TGCAGTGGAG CCCTGACCGC AACGCCGGCT TCTCCGGCGC CAACCCCCAG CGGCTCTACC TGCCGGTCAT CATCGACCCC GAATACCACT ACGAGGCGGT AAACGTGGAG ATTCAGGAGC GCAACCCCAC GTCGCTCTTA TGGTGGATGC GCCGCACCAT CGCCGTGCGC CGCCGCCACC GGGCCTTCAG CAGCGGCACC CTGGAGATGC TCTATCCGGC CAATCACCGG GTCCTCGCCT TTCTCCGGCG CCACGAAGAC GAGGTGATCC TCGTAGTGGG AAACCTCTCC CGCTTCGCCC AGGCCGTGAG CCTCGACCTG AAGGAGTTCG CCGGCATATC GCCAGCAGAC CTCTTCAGCC GGAACCGGTT TCCGGTCATC CGCGAAATCC CCTACCCCCT CACCCTGGGC CCCCACGATC ATTTCTGGTT CATCCTGAGC CGTGCAGAGT CGCCACGCCT GCCAGAGGGA GAACTGCCGC GGATCAACCT CCCGGGAGGA CTCCCGTGGT GGGAGGCCCT CCAGCATACC GGAGGGGACA CCCGCCTGGA ACGGGCGACC ACCGACTACC TGAACCGAAG CGGCTGGTTC CGGGGGAAAG CCCGGGCAAT CATCGGCTAT GCCCTGCGCG ACACCGTGCT TCTGCGGACA TCAGACCAGG TCTTTCCCCT GTTCTTCCTG GAGGTCCGCT ACCAGAACGG CGCGCCGGAA ACCTACCTGA TCCCCGTTGC GTTTCTCCGG GGCCCCGGGG CGAAACGGGT CGATGCCGAA TCGCCACAGG CGGCCATTGC ATCCCTCTCC GTGGGGGACG AAGCAGGGAT CCTCTGCGAT GCGCTCCATG ACCGGGAGTT CAGGGACGCG CTCCTCGCCC TTGCCCTTGG CCGGCGCCGA CTCCATGGTA AACGGGAGAG CCTCGTCGTA CCGCTCCATG GGAGAGGAGG CCACGCCGAA GGAATGCGGG AAACGGAGCA TCTCATTTCC GAGCTCGTCA CGGGGGAAGA GGCGAGCAGT GTCATCCTCT ATGGCGATCG GCACGTGTTC AAGCTGTACC GCACGGTGGA ACCGGGGGTG AATTCGGAGG TGGAGCTGGT CCGGTTTCTG ACGGAAAAGT CCCGCTACCC CAACATTGTC CCCTTCCAGG CGAGTCTCGA GTTGCGCCAT CCCGGCACCG AACCATGCAC CATTGGCCTT GTGCAGGAAT ATGTGAAAAA CCAGGGTAAC GGCTGGCGGC TCGCGCTCCA CCTCCTCGGC CAGTACTTCG AGCGGATTCT CTCCCGCCGG GGCGAGATCC CTCCTCCGCC GAAGCGGTTC TCGAGCCTCA TAGACGGCAG CGCCTGCACC GTTCCGGAAC CGGTCGCGAA TCTCATTGGC GGCTTCTATC TGGAAATGGC GGGACTTCTC GGGCGTAGAA CCGCCGAACT CCACCTGGCC CTTGCCGCGG GGGGAAACGA TCCGGCCTGG AAACCGGAGG CGTATTCAAC CATTTACCAG CGCTCCGTGT ACCAGTCCAT GCGCAACCAG GCACGGCGCA CCCTTCAGCT CCTGTCCCAG AACCGCAATC TTCTGCCGAT CGACGACCAG GGACCGGCTG ACCGGGTCCT GGGGGCCGAA AAGGAGATTC TCTCCTGGCT GGCCCAAATC GTCGGCCGGC GGATAGGGAC GATGAAGATC CGCATCCACG GCAATTTTCA CCTGGGGAAA GTGCTCTTCA CCGGCAAGGA TTTCGTAATC CTCGACTTCG AGGGGGAGCC GGACCGGACC CTCAGCGAGC GCCGCATCAA GCGCTCTCCC CTGAGGGACG TGGCATCAAT GATCCGCTCC TTCCACGCTG CCACGCTGAC TGCCCTCGCA CGGCATGGGA ACGGCCGTTC CGGAGACGTC CAGCTTCTGG AGCCGTGGGC GGATGCCTGC TATTACCACG TGAGCTGCCG CTACCTCGCG GGGTACCTCG AACGGATGGG GAACAGTCCC CTCGTTCCGG CAGACCGGAA CGACCTGGCG ACCCTCCTCC GCTCGTTCCT GCTCGACAGG GCGCTCCGCG ACCTCGGGTT CGCCCTGGGC AACCGCCCCG AAACGGCCTC GTCCCCCCTG AAGGGGATCG AGACGGTGCT GCGGGAATAC GGGGAATAG
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Protein sequence | MARREPLRGG NPLWYRDAII YQLHVKAFAD SDGDGMGDFR GLMGKLDYLQ SLGITAIWIL PFYPSPLRDD GYDIADYYSV NPSYNTLREF REFLRAAHAR RIRVITELVL NHTSDQHPWF QRARRAKPGS AHRDYYVWSD NPDRYQGTRI IFQDFETSNW SWDPVAKAYY WHRFYSHQPD LNYDNPKVQA EMLRVIDYWL GMGVDGVRLD AVPYLFEREG TNCENLPETH AFLKKLRAHV DASFPNRMLL GEANQWPEDA IAYFGEGDEC NMLFHFPLMP RMYMAIEMED RFPVIDIIDQ TPAIPEGCQW AIFLRNHDEL TLEMVTDEER DYMYRIYAAD PKARINLGIR RRLAPLMERD RRKIELMNAL LFSLPGTPII YYGDEIGMGD NYYLGDRNGV RTPMQWSPDR NAGFSGANPQ RLYLPVIIDP EYHYEAVNVE IQERNPTSLL WWMRRTIAVR RRHRAFSSGT LEMLYPANHR VLAFLRRHED EVILVVGNLS RFAQAVSLDL KEFAGISPAD LFSRNRFPVI REIPYPLTLG PHDHFWFILS RAESPRLPEG ELPRINLPGG LPWWEALQHT GGDTRLERAT TDYLNRSGWF RGKARAIIGY ALRDTVLLRT SDQVFPLFFL EVRYQNGAPE TYLIPVAFLR GPGAKRVDAE SPQAAIASLS VGDEAGILCD ALHDREFRDA LLALALGRRR LHGKRESLVV PLHGRGGHAE GMRETEHLIS ELVTGEEASS VILYGDRHVF KLYRTVEPGV NSEVELVRFL TEKSRYPNIV PFQASLELRH PGTEPCTIGL VQEYVKNQGN GWRLALHLLG QYFERILSRR GEIPPPPKRF SSLIDGSACT VPEPVANLIG GFYLEMAGLL GRRTAELHLA LAAGGNDPAW KPEAYSTIYQ RSVYQSMRNQ ARRTLQLLSQ NRNLLPIDDQ GPADRVLGAE KEILSWLAQI VGRRIGTMKI RIHGNFHLGK VLFTGKDFVI LDFEGEPDRT LSERRIKRSP LRDVASMIRS FHAATLTALA RHGNGRSGDV QLLEPWADAC YYHVSCRYLA GYLERMGNSP LVPADRNDLA TLLRSFLLDR ALRDLGFALG NRPETASSPL KGIETVLREY GE
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