| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3467 |
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| Symbol | |
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| ID | 3739180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3882655 |
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| End bp | 3884493 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637780756 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_386401 |
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| Protein GI | 78224654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAGT GGCATCTGGA CATGGGGGCG ACCCCCCTTG CCGGGGGAGT TCGCTTCAGG
GTATGGGCCC CTTTGGCCGA GTCGGTGGCG GTCATCCCCT GCGGGAAAGA GGCATCGTAC
CCCCTCTCCC GGGCCGGCGA ATACTTCCAG GGGACCATCG CCGGCATGGC CCCGGGAGAC
CGTTACTGGT ACCTGCTTGA CGGCACTCTC CGGCGTCCCG ACCCCGCGTC ACGGAGCCAG
CCCGACGGGG TCCACGGTCC ATCCCAAGTG GTGGCTCCGG TCTCCTTCTG CTGGACCGAT
GGCCAGTGGC GGGGGCTGAA GCTTGAAGAA CTGATCACCT ACGAGCTCCA CGTGGGGACC
TTCACCCCCG TGGGTACCTT CACGGCGGCA ATCAGGCGCC TCGATTACCT GGCGGAGCTG
GGAGTGACCG CGGTGGAGCT CATGCCGGTG GCGGAGTTTC CCGGCACCCG CAACTGGGGG
TATGACGGGG TTTTCCCCTT TGCCCCGCAC CACGCCTACG GAGGGGCGAA CGGGCTCAAG
GCCCTGGTGG ACGCCTGCCA CCGGCGGGGG CTCGCCGTGA TCCTCGACGT GGTCTACAAC
CACCTCGGCC CCGAGGGGAA CTATCTCCAC CCCTTTGCCC CCTACTTCAC CGACCGCTAC
CGCACGCCGT GGGGAGATGC CGTCAACTTC GACGGACCCG ACAGCAACGG GGTGCGCCAC
TACGTAATCG CCAACGCCCT CCACTGGGTA AGCGAGTACC ACGTGGACGG CCTGCGCCTC
GACGCCATCC ACGGCATCTA CGACTTCAGC GCCCGCCACA TCCTTCTGGA CATCAGCCAG
GCGGTCGATT CCCTGGCCCG GCAGCTGGGG AGGAAGGTCC ACGTCATCGC CGAGAGCGAC
CTGAACGACG TGCGGACCAT CACGCCGCCG GAATGGGGGG GACACGGCTG CCACGCCCAG
TGGTGCGACG ATTTCCACCA CGGGCTCATG ACGTACCTCA CCGGGGAACG TCAGGGGTAT
TACGCGGATT TCGGCCTCTT CGGCCATCTG GAGAAGGCTT TTCGGGAAGG GTTCGTTTAC
TCCGGCCAAT ACTCCCGCCA CCGCCGGCGC CGCCACGGCA GCCCGTCGGC GGCCCGTCCA
CCCCGGCAGC TGGTGGTCTT CTCCCAGAAC CACGACCAGG TGGGAAACCG GCTACGGGGG
GACCGCCCCT CGCTCCGCCT CTCCCTGGAG CAGCTCAAGC TGGCCGCCGG CGCGGTCATC
CTCTCCCCCT ACCTCCCCCT TCTCTTCATG GGGGAGGAGT ACAGCGAAAC CGCACCCTTT
CCCTACTTCA CGAGCCACGG CGACCCGGAG CTGGCGGAGG CGGTGCGGCA GGGGCGCCGG
GAAGAGTTCG CCTCCTTCGG CTGGGAGGCC GAGGTGCCTG ACCCCCAGGC CGAAGAGACC
TTCCTCGCCG CCAGAATCGA CCCGGAGCGC CGTCACCAGG GGTGGCACCG CTCCCTGTAC
GCCTTTTACC GGGAAGTGAT CCGGCTCCGC CGGGAGCTTC CGCACCTGCG CCACCCCGAG
CGGGAGGAGG TGGCGGTGGT CGGGCTGGAA GCGGACCGGG TCATCGCCCT CCGCTATCGC
CATGGCGGGA GAGAACTCAT CACCCTCTTT GCCCTGGGGA AAACTCCCCG CACCGTCCGG
CTCCCCTTCA GACACGGCGA ATGCCGCAAG CTCCTCGATT CGGCCGGGAA GAGCTGGGGC
GGTCCGGGGA GCATCGCGCC GGAACGAATC GGCGCTGACG GCGATGGCGC AGGCCTCACC
CTCGCGCCCT TCAGCGTCAC GCTCTACGGC ACAGGGTAA
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| Protein sequence | MGEWHLDMGA TPLAGGVRFR VWAPLAESVA VIPCGKEASY PLSRAGEYFQ GTIAGMAPGD
RYWYLLDGTL RRPDPASRSQ PDGVHGPSQV VAPVSFCWTD GQWRGLKLEE LITYELHVGT
FTPVGTFTAA IRRLDYLAEL GVTAVELMPV AEFPGTRNWG YDGVFPFAPH HAYGGANGLK
ALVDACHRRG LAVILDVVYN HLGPEGNYLH PFAPYFTDRY RTPWGDAVNF DGPDSNGVRH
YVIANALHWV SEYHVDGLRL DAIHGIYDFS ARHILLDISQ AVDSLARQLG RKVHVIAESD
LNDVRTITPP EWGGHGCHAQ WCDDFHHGLM TYLTGERQGY YADFGLFGHL EKAFREGFVY
SGQYSRHRRR RHGSPSAARP PRQLVVFSQN HDQVGNRLRG DRPSLRLSLE QLKLAAGAVI
LSPYLPLLFM GEEYSETAPF PYFTSHGDPE LAEAVRQGRR EEFASFGWEA EVPDPQAEET
FLAARIDPER RHQGWHRSLY AFYREVIRLR RELPHLRHPE REEVAVVGLE ADRVIALRYR
HGGRELITLF ALGKTPRTVR LPFRHGECRK LLDSAGKSWG GPGSIAPERI GADGDGAGLT
LAPFSVTLYG TG
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