Gene Gmet_3437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3437 
Symbol 
ID3741199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3857970 
End bp3859388 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content64% 
IMG OID637780728 
Productpeptidase S1C, Do 
Protein accessionYP_386374 
Protein GI78224627 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCT GTCGCCTGTT CATTGTCATC ATTGCGCTCT TTACCGTTGT GCCCGCCTGC 
TCGAAGAAGG AAGATAAGCT CTTCTACGAG ACGGGGCGGG CCGAAGCGCC GGTAAAGGAC
GTTCCCAAGG ACATCATGGC TACCCAGCAG GCCTTCGTGG AGTTGGTGAA GAAGGTGACG
CCGTCGGTGG TCAACATCTC CACCATCAGC AGGAAGAAGG TCGAGCAGCC CTTTTTCGAA
TTTTCTCCCT TATTCGGCGA CTTGTTCGGC GACGGCAGGC CCCGCTACCG CCGCGACAAG
AGCCTCGGCT CCGGATTCAT CATCAACAAG AGCGGCTACA TCGTCACCAA TGACCACGTG
GTGCGGGACG CCGAGACCAT CAAGGTCAGG CTCTCCAACG AAAATGTCTA TGACGGCAGG
GTTGTCGGCA GTGATCCCAA GACCGACATC GCCGTCATCA AGATCGACGC CAAGGAGGAT
CTCCCCGTGG CGGTCCTGGC CGATTCCGAC AAGCTCCAGG TGGGGCAGTG GGCCATCGCC
ATCGGCAATC CTTTCGGCCT CGACCGGACC GTGACCGTGG GGGTAGTGTC GGCCACCGGC
CGCTCCAACA TGGGGATCGA GACCTACGAG GACTTCATCC AGACCGACGC CTCCATCAAC
CCCGGCAACT CGGGGGGGCC GCTCCTGAAC GTCCACGGGG AGGTGATCGG CATCAACACC
GCCATCGTGG CCGCCGGCCA GGGGATCGGC TTTGCCATCC CCGTCAACAT GGCCAAGCAG
ATCGTCACCC AGCTCGTCAC CAAGGGGAGT GTGAGCCGTG GGTGGCTCGG CGTATCAATC
CAGCCGGTGA CCGACGAGAT TGCCCGGGAG TTCGGCCTCA AGAAGGCCCG GGGGGTGCTG
GTGGCCGACG TCGTGGAGGG GAGCCCCGCT GCCAAGGGGG GGATCAAGCA GGGAGACATT
ATCCTCGACT TCGCCGGCAC CGAGATCAAG GACGCCCAGC ACCTCCAGCG GGTCGTGGCC
GCAACGGCAC CGGGGAAGAC CGTCCAGGTC ACGGTGTTCC GTGGGGGGCG CGAGGTGAAG
CTTTCCCTCA CCTCGGCCAG CGCCGACAGC GCCGGGGCCC GGCAGGCCCG ACCCCAGGGG
GAGGAGCCCG ACCTCCTCGG TCTGATGGTC GAGGAAATTC CTTCCGACCT GCGCCGCCGT
GGCGTATCCG GCGTGGTCGT GGCCGAGGTT GACGAGGAGG GGATTGCCGC CGAGGCGGGG
ATCCAGCGTG GCGACATCAT CGTTTCGGTG AACCGCAAGG GGGTCGCGAC CCGGGCCGAA
TATGAACGCG CCATGGCGGA AGCCGGACGC CGGGGCACGG CGATCCTGCT AGTGCGCCGG
GGCAACGCCA GCATTTTCTT CTCGCTCAGG CTGCGCTAA
 
Protein sequence
MRICRLFIVI IALFTVVPAC SKKEDKLFYE TGRAEAPVKD VPKDIMATQQ AFVELVKKVT 
PSVVNISTIS RKKVEQPFFE FSPLFGDLFG DGRPRYRRDK SLGSGFIINK SGYIVTNDHV
VRDAETIKVR LSNENVYDGR VVGSDPKTDI AVIKIDAKED LPVAVLADSD KLQVGQWAIA
IGNPFGLDRT VTVGVVSATG RSNMGIETYE DFIQTDASIN PGNSGGPLLN VHGEVIGINT
AIVAAGQGIG FAIPVNMAKQ IVTQLVTKGS VSRGWLGVSI QPVTDEIARE FGLKKARGVL
VADVVEGSPA AKGGIKQGDI ILDFAGTEIK DAQHLQRVVA ATAPGKTVQV TVFRGGREVK
LSLTSASADS AGARQARPQG EEPDLLGLMV EEIPSDLRRR GVSGVVVAEV DEEGIAAEAG
IQRGDIIVSV NRKGVATRAE YERAMAEAGR RGTAILLVRR GNASIFFSLR LR