Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3420 |
Symbol | recR |
ID | 3741216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3837754 |
End bp | 3838347 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780710 |
Product | recombination protein RecR |
Protein accession | YP_386357 |
Protein GI | 78224610 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000000418809 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAGT CCTCAAACTC GTTTGCGCGG CTCCTTGCGG AGCTGCAGAA ATTGCCGGGT GTTGGTGAGA AAACCGCGTT GCGGCTCGCG TTTCACCTGC TTAAATACCC GGAGAATACC GCAGCCCTTG CTGAGAGCCT CGGCGAGGTG CTGAGCCGGG TGAAATTTTG TTCCGTCTGC TTCGGCATCA CCGAGGAAGA TCCCTGCCGG CTCTGCAGCA GCGACCGCGA CGAGACGTCC CTTTGTGTTG TCGAGGAACC CCAGGACCTC CTGGCGGTGG AGAGGACCCG GGCCTTCCGG GGACGTTACC ACGTCCTTCA GGGGGCCCTG TCGCCGTTGA ACGGGGTCAC TCCCGACCGG CTCCGGATCG CCGAACTGAT GCGGCGGCTC GAAGAGGGTA CGGTGCGGGA GGTGGTCATT GCCACCAACT TCTCCGTTGA GGGGGAAACG ACGGCCCTCT ATCTTGCGCG GCAGATCAAG CCCCTTGGCA TCAGGGTCAC GCGGCTTGCC CACGGCATCC CCCTGGGGAG CGATCTGGAG TATGTGGACG CGGCCACGGT GCAGCGGGCC CTTGAGGGAC GGAGCGAATT GTAG
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Protein sequence | MLQSSNSFAR LLAELQKLPG VGEKTALRLA FHLLKYPENT AALAESLGEV LSRVKFCSVC FGITEEDPCR LCSSDRDETS LCVVEEPQDL LAVERTRAFR GRYHVLQGAL SPLNGVTPDR LRIAELMRRL EEGTVREVVI ATNFSVEGET TALYLARQIK PLGIRVTRLA HGIPLGSDLE YVDAATVQRA LEGRSEL
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