| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3419 |
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| Symbol | |
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| ID | 3741215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3833961 |
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| End bp | 3837548 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637780709 |
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| Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
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| Protein accession | YP_386356 |
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| Protein GI | 78224609 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000141047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCA ACATGGTTAC CATCGACGGC AACACAGCGG CCGCCCACGT GGCCCACGCC
ACAAACGAGG TGATTGCCAT CTACCCCATC ACCCCGTCTT CGGTCATGGG AGAGATCTCG
GACATGAAGA GCGCCATGGG TGAGAAGAAC ATCTGGGGGA CCATTCCGTC GGTCGTCGAG
ATGCAGTCCG AGGGGGGCGC CTCCGGTGCC GTCCACGGCG CGCTCCAGGC AGGGGCGCTG
ACCACCACCT TCACCGCCAG CCAGGGCCTG CTCCTGATGA TCCCGAACAT GTTCAAGATC
GCCGGCGAGC TGACCTCCAC GGTCTTCCAC GTCTCGGCCC GCGCCATCGC TGCCCAGGCT
CTCTCCATCT TCGGCGACCA CTCCGACGTC ATGTCCTGCC GCTCCACCGG CTGGGCCATG
CTCTGCTCCA ACAACGCCCA GGAGGTCATG GACTTCGCCC TGATCTCCCA GGCCGCCACG
CTCCGCGCCC GGGTGCCGTT CCTCCACTTC TTCGACGGAT TCCGTACCTC CCACGAGGTC
TTGAAGGTGG AAGAGCTGAC CTTCGACGAC ATGCGCGCCA TGCTGGACGA CGAGCTGATC
GCCGCCCACA AGGCCCGCGG ACTCTCCCCG GATCACCCCT TCATGCGCGG CACCGCCCAG
AACCCCGACG TTTACTTCCA GGGGCGCGAG ACGGTAAACT CCTACTACCC GAAGTGCATC
GAGATCGTCG AAGAGGAGAT GAACAAGTTC GCCAAGATCA CGGGCCGCCA GTACAAGCTG
GTGGACTACG TGGGCGCCCC CGACGCCGAC CGCGTCATCG TGATCATGGG CTCCGGCGCC
GACACGGCGC AGGAGACGGT TGAGAACCTC TCCGCCAAGG GTGAGAAAAT CGGCGTGGTG
AAAGTCCACC TCTACCGGCC GTTCCCCATC GACGCCTTCA TCGCCGCTCT GCCGAAGACC
GTAAAGAAGA TCGCCGTCCT CGACCGGACC AAGGAGCCCG GCGCCCTGGG CGAGCCCCTC
TACATGGATG TCCGCACTGC CATCGGCGAG GCCATGGCCG ACGGCAAGTG CCAGTTCGAC
GGCTACCCGG TTATCGTCGG CGGCCGCTAC GGCCTCGGAT CCAAGGAGTT CACCCCGGCC
CAGGCCAAGG CGGTGTTCGA TAGCCTCGCC ACCGACAAGC CGAAGAGGAA CTTCGTGGTC
GGTATCACCG AGGACGTGAC CAACAGCAGC CTCCCCTGCG ATCCGGCCTT CTTCAACCCG
ATGGAAGGGG CCTACCAGGC CATGTTCTTC GGCCTCGGCT CCGACGGCAC CGTGGGCGCC
AACAAGAACT CCATCAAGAT CATCGGCGAG ATGACCGACA ACAACGCCCA GGCCTACTTC
GTCTACGACT CCAAGAAGGC CGGCTCCATG ACCACGTCGC ACCTGCGCTT CGGCAAGAAG
TATATCCGGG CGCCGTATCT GGTGCAGGAG GCCGACTTCG TGGCCTGCCA CAACTTCGCC
TTCGTGGAGA AGTACGACAT GCTGGCCAAG GCCAAGCAGG GGGCCACGTT TCTCCTGAAC
GCCCCCTTCG ACCACAACGA GATCTGGGAC AAGCTCCCCA CCGACGTGCA GCAGCAGATC
ATCGACAAGA AGCTGAAGTT CTACGTGATC GACGGTGTGC GGCTCGGCAA CGAGATCGGC
CTCGGTCCCC GGATCAACGT CATCATGCAG ACCGCGTTCT TCAAGATCTC CAACATCATC
CCGCTGGATC AGGCCGTTGC CGAGATCAAG GGCGCCATCA AGAAGTCCTA CGGCAAGGCG
GGTGAAGCGG TCGTTGCCAT GAACTATAAG GCGGTGGATG CCGGCCTCAA CAACTTCTAC
GAGGTGGCGG TGCCCGAGAA GGCCACCAGC ACCATCACGA AGCCGCCGGT CGTCAGTCCC
AAGGCGCCCC AGTTCGTTCA GGAGACCACC GCGCCCATGA TCGCCGGCCT CGGCGACGAT
CTGCCGGTTT CCAAGATGCC GGCCGACGGC ACCTTCCCGA CGGCCACCGC CCAGTTCGAG
AAGCGGAACA TCGCCGTGGA TATCCCGGTA TGGGACGAGC AGCTCTGCAT CCAGTGCGGC
ATCTGCTCCT TCGTCTGCCC CCACGCCACC ATCCGGATGA AGGCCTACGA CGCCTCTGTC
CTTTCCGGCG CTCCGGCCAC CTTCAAGTCG GTGGACTGCA AGGTTCCCGA GTTCAAGGGA
CAGAAGCTGA CCGTCCAGGT GGCTCCGGAA GACTGCACCG GCTGCGGCGC CTGCGTCCAC
AACTGCCCGG CCAAGAGCAA GGAAGACCCG AACCACAAGG CCATCAACAT GGCATTCCAG
GCCCCGCTCA GAGCACAGGA AGTGGCGAAC TGGGATTTCT TCCTCACCAT TCCCGATGTT
GATCCGACCG TGGCCAAGCT GGATACCGTC CGCGGCTCCC AGCTGGTTCG CCCGCTGTTC
GAGTTCTCCG GCGCTTGCGC CGGCTGCGGC GAGACCCCGT ACCTGAAGCT TCTGACCCAG
CTCTTCGGCG ATCGGACCCT CATCGCCAAC GCCACCGGCT GTTCCTCCAT CTACGGTGGC
AACCTCCCGA CCACCCCCTA TGCCAAGCGG GCCGACGGGC TTGGTCCGGC TTGGTCAAAC
TCCCTGTTCG AGGACAACGC CGAGTTCGGC TACGGCATGC GGCTGGCCGT GGACAAGTTC
AACGCCATGG CCCTTGAGCT GATCGACAAG CTTTCCTCCT CCTGCTCCTG CTCTTCCTGC
ACGAGCGCGG TACCCCTCAT GAACGAGATC AAGGGTGCCG ACCAGTCGAC CCAGGCCGGC
ATCGAGGCCC AGCGCGGTCG GGTGGCGGAG CTGAAGAAAG CCCTGGCCGG CTGCCCCGAG
GCGGAGGCCA AGCGTCTCCT CACCGTGGCC GACTACCTGG TCAAGAAGTC GATCTGGTGC
ATCGGCGGTG ACGGCTGGGC CTACGACATC GGCTACGGCG GCCTCGACCA CGTCATTGCC
AGCGGCAAGA ACATCAACCT GCTGGTTCTC GACACCGAGG TGTACTCCAA CACCGGCGGC
CAGGCCTCCA AGTCGACCCC GCTGGGCGCC GTTGCCCAGT TCGCCGCCGG TGGCAAGGCC
GTTTCCAAGA AGGACCTCGG CATGATGGCC ATGTCCTACG GCTCGGTTTT CGTGGCGGCC
GTCTCCCTGG CCAATCCGGC CCAGTGCATC AAGGCCTTGC TGGAGGCGGA AGCCTATGAC
GGCCCGTCCC TCATCATCGC CTACGCGCAC TGCATCGCCC ACGGCATCGA CATGACCAAG
GCCGTCGATT GCCAGAAGCG GGCGGTCAAC TCCGGCTACT GGCCGCTGTA CCGCTACAAT
CCGCAGCTTG CCGCCGAGTG CAAGAACCCG CTGCAGCTGG ACAGCAAGGC CCCTACCATC
GCCTTCGACG AGTACGTCAA CAGCGAGAAC CGCTACCGCG TCCTCAGAAA GAACAACCCG
AAGGGGTACG AGGAGCTGAT GCGGAAGGCG GCTGCCTGGT CCAAGGCCCA CTTCGGCTAC
TACCAGAAAC TGGCGGCCCT CAACTTCGAG GAGACCTGCG AGAAGTAA
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| Protein sequence | MSRNMVTIDG NTAAAHVAHA TNEVIAIYPI TPSSVMGEIS DMKSAMGEKN IWGTIPSVVE
MQSEGGASGA VHGALQAGAL TTTFTASQGL LLMIPNMFKI AGELTSTVFH VSARAIAAQA
LSIFGDHSDV MSCRSTGWAM LCSNNAQEVM DFALISQAAT LRARVPFLHF FDGFRTSHEV
LKVEELTFDD MRAMLDDELI AAHKARGLSP DHPFMRGTAQ NPDVYFQGRE TVNSYYPKCI
EIVEEEMNKF AKITGRQYKL VDYVGAPDAD RVIVIMGSGA DTAQETVENL SAKGEKIGVV
KVHLYRPFPI DAFIAALPKT VKKIAVLDRT KEPGALGEPL YMDVRTAIGE AMADGKCQFD
GYPVIVGGRY GLGSKEFTPA QAKAVFDSLA TDKPKRNFVV GITEDVTNSS LPCDPAFFNP
MEGAYQAMFF GLGSDGTVGA NKNSIKIIGE MTDNNAQAYF VYDSKKAGSM TTSHLRFGKK
YIRAPYLVQE ADFVACHNFA FVEKYDMLAK AKQGATFLLN APFDHNEIWD KLPTDVQQQI
IDKKLKFYVI DGVRLGNEIG LGPRINVIMQ TAFFKISNII PLDQAVAEIK GAIKKSYGKA
GEAVVAMNYK AVDAGLNNFY EVAVPEKATS TITKPPVVSP KAPQFVQETT APMIAGLGDD
LPVSKMPADG TFPTATAQFE KRNIAVDIPV WDEQLCIQCG ICSFVCPHAT IRMKAYDASV
LSGAPATFKS VDCKVPEFKG QKLTVQVAPE DCTGCGACVH NCPAKSKEDP NHKAINMAFQ
APLRAQEVAN WDFFLTIPDV DPTVAKLDTV RGSQLVRPLF EFSGACAGCG ETPYLKLLTQ
LFGDRTLIAN ATGCSSIYGG NLPTTPYAKR ADGLGPAWSN SLFEDNAEFG YGMRLAVDKF
NAMALELIDK LSSSCSCSSC TSAVPLMNEI KGADQSTQAG IEAQRGRVAE LKKALAGCPE
AEAKRLLTVA DYLVKKSIWC IGGDGWAYDI GYGGLDHVIA SGKNINLLVL DTEVYSNTGG
QASKSTPLGA VAQFAAGGKA VSKKDLGMMA MSYGSVFVAA VSLANPAQCI KALLEAEAYD
GPSLIIAYAH CIAHGIDMTK AVDCQKRAVN SGYWPLYRYN PQLAAECKNP LQLDSKAPTI
AFDEYVNSEN RYRVLRKNNP KGYEELMRKA AAWSKAHFGY YQKLAALNFE ETCEK
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