| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3404 |
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| Symbol | |
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| ID | 3741182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3819234 |
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| End bp | 3820253 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780694 |
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| Product | pyridoxal phosphate biosynthetic protein PdxA |
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| Protein accession | YP_386341 |
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| Protein GI | 78224594 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACA CTAAACCACG TATTGTCATA ACCATGGGGG ACCCCACCGG GGTCGGCCCC
GAGATCATCG CCGCAACCCT GGCCGAGCCA GAGGTGCGCC AATGCTGCCG CTTCCTCGTT
GTCGGCGACA GCGCGGCCAT GGCACGGGGA ATCACCGTCG CAGGCGCCGC GCTCCGGGTA
GAGCGGACCG ATACCCTGAA CTGGGAAGAA AGCAAAGAAG GGGTGCTCCC CCTTTGGGAG
ATTTCGTCCC TCACCGAAGC GGACATGCAG TATGGCTGCC CCACCGTTGC CAGCGGCGAC
GCCATGTACC GGGCCATCTG CGAGGCCGCG CGACTCTGCC TTGAAGGAAA TGCCGACGCC
ATGGCGACCG CTCCCATCAG CAAGGAGGCC CTGAACCGGG CCGGGCATCG GTATCCGGGG
CATACGGAAC TCCTGGCCGA ACTGGCGGGG GCGGAGCGGG TCGTCATGAT GCTGGCCGGC
TTCCGGCTCC GGGTCACTCT CGTCACCATC CACGAGGCTT TGGCCGACGT GCCGCGTCTA
GTGACCTTCG AGCGGGTGCT GGAGACAATC CGGATTACCC ACCGGGATCT GCACCGCTAT
TTCAGGAGGA ATCCCCGCAT CGCGGTCCTG GCCCTCAATC CCCACTGCGG CGAAGGGGGG
ATGTTCGGGG ACGAGGAGGC GCGCATCATT GCCCCTGCCG TGGCGGCTGC CCGGCAGGAG
GGGATCGATG CGATCGGCCC CCTCTCGGCC GATACGCTTT TCCACTTCGC CGTCCAGGGC
GCCTACGACG CGGTGGTCTG CATGTACCAC GACCAGGGAC TCATCCCCCT GAAGCTCCTC
CACTTCGACG ACGGGGTCAA CGTGACCCTA GGGCTCCCCA TTATCCGCAC CTCCGTGGAC
CACGGCACCG CCTACGATCT GGCCGGAACC GGCAGGGCCT CGGCCGAGAG CATGAAGGCG
GCCATCCTCA TGGCGGCGGA GATGGCGCGG GTGAAGGGAT CGGGAGGCGG AACACCGTGA
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| Protein sequence | MPNTKPRIVI TMGDPTGVGP EIIAATLAEP EVRQCCRFLV VGDSAAMARG ITVAGAALRV
ERTDTLNWEE SKEGVLPLWE ISSLTEADMQ YGCPTVASGD AMYRAICEAA RLCLEGNADA
MATAPISKEA LNRAGHRYPG HTELLAELAG AERVVMMLAG FRLRVTLVTI HEALADVPRL
VTFERVLETI RITHRDLHRY FRRNPRIAVL ALNPHCGEGG MFGDEEARII APAVAAARQE
GIDAIGPLSA DTLFHFAVQG AYDAVVCMYH DQGLIPLKLL HFDDGVNVTL GLPIIRTSVD
HGTAYDLAGT GRASAESMKA AILMAAEMAR VKGSGGGTP
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