Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3400 |
Symbol | |
ID | 3741178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3814163 |
End bp | 3815233 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780690 |
Product | pilus retraction protein PilT |
Protein accession | YP_386337 |
Protein GI | 78224590 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TCGACACACT CTTTAAAATG CTCAAGGATC AGGGGGCTTC CGACCTCCAC CTCTCCTCCG GGGCGCCCCC CATCTTCCGG CTCCACGGCG AGATGGCCCG CCAGAACTTC AAGCCTCTCA CCCATGACGA GCTGAAGGCC ATCCTCTACG AGATCCTCAC CGAGAAGCAG AAGGCCGACT TCGAGGAGCG CCACGACCTC GACTTCGCCT ACGCCATCCC GGGGCTCGCC CGGTTCCGGG GGAACTACAT GCTGACCCAC CGGGGGATCG CCGCGGTCTT CCGGATCATC CCCAGCAAGA TCCTCTCGGC CGACGATCTC AGCCTCCCCG ACGGGGTCCG GCGCATGACC CTGTTCAAGA AGGGGCTCGT GCTCGTCACC GGCCCCACCG GCTCGGGGAA ATCCACCACC CTGGCCGCCA TGATCGACCT CATCAACGCA ACCCGCAAGG AGCACATCCT CACCCTGGAG GACCCCCTCG AATTCATCCA CGAGAACAAG ATGTCGCTCC TGAACCAGCG GCAGATCGGC GAACACTCCA TGACCTTCAC CGCTGCCCTG CGGGCAGCCC TGCGGGAAGA CCCCGACGTC ATCCTCGTGG GGGAGATGCG GGACCTGGAG ACCATCGGCC TCGCCATGAG TGCCGCCGAG ACCGGCCACC TGGTCTTCGG GACGCTGCAC ACCAACTCGG CGGCCAAGAC CATCGACCGG ATCATCGACG TCTTCCCCAC CGACCAGCAG GAGCAGACCC GGGCCATGCT CTCCGAATCC CTCAAGGGGG TCGTCTGCCA GCAGCTCCTG AAGACCGCCG ACGGCAAGGG GCGGGTGGCG GCCCTGGAGA TCATGCTCGG CACCCCGGCC ATCGGCAACC TGATCCGCGA GGGGAAGACC TTCCAGATCC CCTCCATCAT CCAGACCGCC AAGCGGGACG GGATGCAGCT CATGGACCAG CACCTCCTGG ACCTCTTCAA GACCAAGCGG ATCACCGCCG AAGAGGCCTA CCGCTGCGCT CAGGACAAGA AACAGTTCGA GCAGTATTTG GCCGAGAAGC CGGCCCAGTA A
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Protein sequence | MARIDTLFKM LKDQGASDLH LSSGAPPIFR LHGEMARQNF KPLTHDELKA ILYEILTEKQ KADFEERHDL DFAYAIPGLA RFRGNYMLTH RGIAAVFRII PSKILSADDL SLPDGVRRMT LFKKGLVLVT GPTGSGKSTT LAAMIDLINA TRKEHILTLE DPLEFIHENK MSLLNQRQIG EHSMTFTAAL RAALREDPDV ILVGEMRDLE TIGLAMSAAE TGHLVFGTLH TNSAAKTIDR IIDVFPTDQQ EQTRAMLSES LKGVVCQQLL KTADGKGRVA ALEIMLGTPA IGNLIREGKT FQIPSIIQTA KRDGMQLMDQ HLLDLFKTKR ITAEEAYRCA QDKKQFEQYL AEKPAQ
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