Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3393 |
Symbol | ubiA |
ID | 3741170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3806792 |
End bp | 3807688 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637780682 |
Product | prenyltransferase |
Protein accession | YP_386330 |
Protein GI | 78224583 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.604924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGTG AGGAAAGGAT GGCCATGGGG ATGTTCGGGA AGATTAAGGT GTTTCTGGAG ATGATCAAGT TCTCCCACAC GGTCTTTGCC CTCCCCTTCG CCTTTACGGG AGCGGTGCTG GCCGCCCGGG GAGTGCCGAC GGCGTACCAG GTGTTCTGGA TCCTCATGGC AATGGTGGGG GCCCGGACGG CCGCAATGGG GATGAATCGG GTCATCGACG CGGAGATTGA TGCCCGCAAC CCCCGCACCG CCGGCCGCGC CATCCCGGCG GGACTCATCG GCAAGGGAAC CGCCGTCGCC TTCATCGTTA TTTCGATCCT CCTCATGCTC TACGCGGCTT ACCGGCTGAA CCCCCTCTGC CTCTACCTGT CGCCAGTGGC CCTCTTTTTC CTGGTCCTCT ACTCCTACTG CAAACGCTTC ACGGCACTGG CCCACGTGGT TCTCGGCATC TGTCTGGCCG CTGCCCCCCT GGGGGCCTGG ATCGCCATCC GGGGGACGGT GGAGCTCCCT GCGGTGCTCC TGGGGCTTGC GGTCCTCTTC TGGGTGGCCG GCTTCGACAT CCTCTACGCC CTCCAGGACC TGGAGTTCGA CAAGGGGGCA GGGCTCCACT CGATTCCGTC CCGGCTCGGG GTGAACGGGT CCCTCTGGAC TGCCCGCCTC TTCCACGTGG CCATGGCGGC GCTCCTGGCG GGGCTGTACG TCAGCGCCGG ACTCGGCGTC TGGTACCTGG CGGGGCTCGG GCTCTGCGTC ACCATGCTCC TCTACGAGCA CTGGCTCCTC CGGGGTGGGG ACCTCTCCCG TCTGGACGCC GCCTTTTTCG CCATGAACGG CTACATCAGC ATTACCCTCT TCGTGGCCAC CTTCGTGGAT GTCCTGGCGC GAAAGGGGGG GGCATGA
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Protein sequence | MVSEERMAMG MFGKIKVFLE MIKFSHTVFA LPFAFTGAVL AARGVPTAYQ VFWILMAMVG ARTAAMGMNR VIDAEIDARN PRTAGRAIPA GLIGKGTAVA FIVISILLML YAAYRLNPLC LYLSPVALFF LVLYSYCKRF TALAHVVLGI CLAAAPLGAW IAIRGTVELP AVLLGLAVLF WVAGFDILYA LQDLEFDKGA GLHSIPSRLG VNGSLWTARL FHVAMAALLA GLYVSAGLGV WYLAGLGLCV TMLLYEHWLL RGGDLSRLDA AFFAMNGYIS ITLFVATFVD VLARKGGA
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