Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3353 |
Symbol | |
ID | 3740668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3771184 |
End bp | 3771672 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637780642 |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_386290 |
Protein GI | 78224543 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000103894 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0125346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA CTAATCGCGC AGTAATAAAG CTCAGGGAAA AATTTTCCGC TTCCGTGCTT GATGTGAAAG AGTTCCGCGG AGAGGTGACG GTTACGGTGA AGCGTGAGGA CATTGTTGAA ATTTGCAATT TCCTCAAGTC GTCGCTTGCC TATAATCTCT GTACCGACGT AACCGCGGTG GACTATCTGG GGAAGCAAGA GCCACGCTTT ATGGTAGTTT ACAATCTTTA TTCGATTCCG AATAAAGACC GCCTCAGGGT TAAGGCGGGG GTTCCGGAGG CTGGCTGCTC CATTGATACG GTTTCCTGCG TCTGGAGCGC GGCCAATTGG TTGGAGCGTG AAGTTTACGA TTTGATGGGT GTGGTCTTCA ATAATCACCC AGATCTTCGT CGGATACTGA TGACTGATGA CTGGGTCGGC CATCCGCTTC GGAAGGATTA TCCGCTGCAG GGGCCTGGTC GTGAGCCTTA CAAAGGGCGG TTGTCGTAG
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Protein sequence | MAETNRAVIK LREKFSASVL DVKEFRGEVT VTVKREDIVE ICNFLKSSLA YNLCTDVTAV DYLGKQEPRF MVVYNLYSIP NKDRLRVKAG VPEAGCSIDT VSCVWSAANW LEREVYDLMG VVFNNHPDLR RILMTDDWVG HPLRKDYPLQ GPGREPYKGR LS
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