Gene Gmet_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3353 
Symbol 
ID3740668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3771184 
End bp3771672 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID637780642 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_386290 
Protein GI78224543 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000103894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0125346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CTAATCGCGC AGTAATAAAG CTCAGGGAAA AATTTTCCGC TTCCGTGCTT 
GATGTGAAAG AGTTCCGCGG AGAGGTGACG GTTACGGTGA AGCGTGAGGA CATTGTTGAA
ATTTGCAATT TCCTCAAGTC GTCGCTTGCC TATAATCTCT GTACCGACGT AACCGCGGTG
GACTATCTGG GGAAGCAAGA GCCACGCTTT ATGGTAGTTT ACAATCTTTA TTCGATTCCG
AATAAAGACC GCCTCAGGGT TAAGGCGGGG GTTCCGGAGG CTGGCTGCTC CATTGATACG
GTTTCCTGCG TCTGGAGCGC GGCCAATTGG TTGGAGCGTG AAGTTTACGA TTTGATGGGT
GTGGTCTTCA ATAATCACCC AGATCTTCGT CGGATACTGA TGACTGATGA CTGGGTCGGC
CATCCGCTTC GGAAGGATTA TCCGCTGCAG GGGCCTGGTC GTGAGCCTTA CAAAGGGCGG
TTGTCGTAG
 
Protein sequence
MAETNRAVIK LREKFSASVL DVKEFRGEVT VTVKREDIVE ICNFLKSSLA YNLCTDVTAV 
DYLGKQEPRF MVVYNLYSIP NKDRLRVKAG VPEAGCSIDT VSCVWSAANW LEREVYDLMG
VVFNNHPDLR RILMTDDWVG HPLRKDYPLQ GPGREPYKGR LS