Gene Gmet_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3346 
Symbol 
ID3740661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3763020 
End bp3763523 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID637780635 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_386283 
Protein GI78224536 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.605889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.446678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGT TCTTCTTCAT GATCGTGGCA GCAGTAGCTG TCCTGGCCAG TATTCTGGTC 
ATTACCTGCA AGAACCCGAT CAACAGCGCG CTCTCTCTCA TTCTGACTTT CTTCTGCTTG
GCAACTCTGT ACGTGACGCT TGATGCACCG TTCATGGCAG CCATACAGGT GTTGGTCTAT
GCAGGCGCAA TCATGGTCTT GATTGTGTTC GTAATCATGC TTCTCAACGT ACGGACAGAA
TCTGGTCGGA GGAGCTCGCA CAGTGTGCTG TTTGGCAGTC TGATCGGACT ATTTAGCTTG
TTCCAGCTGT TCTACCTGTT TAATAGAAGT TCGCTCACAG GGCAGAAGGG AGCAATTGAT
TCGGCTCTCA TAAACAAGGT TGGCCATACT GAATTGATCG GCAAAGCGTT GTACACTGAC
TTCCTTCTCC CCTTCGAGGT GACCTCCATT CTTCTCTTGG TGGCCATCAT CGGCGCGGTT
GTTCTCACGA AGAAGAAAAT CTAA
 
Protein sequence
METFFFMIVA AVAVLASILV ITCKNPINSA LSLILTFFCL ATLYVTLDAP FMAAIQVLVY 
AGAIMVLIVF VIMLLNVRTE SGRRSSHSVL FGSLIGLFSL FQLFYLFNRS SLTGQKGAID
SALINKVGHT ELIGKALYTD FLLPFEVTSI LLLVAIIGAV VLTKKKI