Gene Gmet_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3343 
Symbol 
ID3740658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3759037 
End bp3760596 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content51% 
IMG OID637780632 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_386280 
Protein GI78224533 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.816819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TTCCCTTAAT CAGCGTGATG ACCTTTCTAC CACTTCTAGG GGTCGTACTG 
CTCTTCTTCG TTCCCAAGCA GAGCCATTCT GCACAGCGGG GGCTTGCACT TCTGGTGGCT
CTTGCGACGT TTGTCGTATC ACTTCCGCTT GTTACCGGCT TCCAGAGCAA CGCTGAGTTC
CAGTTTGTGG AGAAGGTACC CTGGATCGCT GCCGGCCCGT ACCAGATGAA TTATCATGTT
GCCATCGATG GAATCAGTCT CTGGCTCGTG ATTCTGACAA CCTTCATCGT GCCAATCGCC
ATTCTTTCAA CCTGGACAGC CGTTGAGAAC AAGGTGAAGG AATACATGAT CTGTCTCCTC
CTCCTTGAGG TCGGGATGCT TGGCGCTTTC GTTTCACTTG ACCTGTTCCT CTTCTACATA
TTTTGGGAGG TCATGCTCAT TCCAATGTAC TTCATCATCG GTATATGGGG TGGGAAAAAC
AAGATATACG CTGCGCTCAA GTTCTTTATC TATACAATGG TCGGTTCGCT CCTGATGCTG
ATCGCTCTTG TCGTCCTTTA CTTTAAGGGC GGAGCCGGCG ACTTCAGTGT GCTTCGCTTC
TATGATCTCG CTCTCGATCC TGCGACCCAG ACCTGGATGT TCCTTGCGTT CGCTTTGGCC
TTTGCCATTA AAGTACCGAT GTTCCCGCTG CATACGTGGT TGCCGGATGC ACATACCGAA
GCCCCGACCG CTGGTTCCGT AATTCTGGCT GCCGTTCTCC TTAAGATGGG AACCTATGGT
TTTGTACGCT TCGCCATGCC GCTTTTCCCG GACGCTACAG CTCAGTTTAC TCCTCTCTTT
GCAGTCCTTT CAGTGATAGG TATTGTGTAT GCTGCCCTTG TGGCTATGGT TCAGGAGGAC
GTAAAAAAAC TTGTTGCCTA CTCCTCAGTT GCACACCTTG GCTATGTTAT GCTCGGCGTG
TTTGCGCTCA ACCAGCAAGG ACTCTCGGGC GGAATGATTC AGATGCTCAA TCACGGTGTT
TCCACTGGCG CACTGTTCCT TATAGTTGGT TTCATCTATG AGCGTCGTCA CACTCGTCTC
ATAACTGATT TCGGCGGATT GGCCAAGCAG ATGCCGGTTT TTGCTACAAT TTTCATGATT
GTCACCCTTT CTTCCATCGG TCTTCCGGGA ACCAACGGCT TTGTTGGAGA GTTCCTTATT
CTCATCGGTG CGTATGAAAG TGAACTGCGT TGGTATGCTG TAATCGGGAC GAGCGGCGTG
ATTCTTTCCG CAGTTTATAT GCTCTGGATG TTCCAGCGTG TCATGTTTGG AGAGCTGAAT
AACCCCAAGA ACCAGACGCT TACAGATTTG AATGCACGCG AAGTGGTGAT TATGCTGCCG
TTGCTCGTGT TGATCTTCGT TATGGGCGTG TATCCTACCC CCTTCATCGA CAAAATGAGC
CCATCGCTTG AGAAATTGAT CGTTCACGTC AAGTCGAAGC AGACCGCCAA GGCACAGATT
CCTCAGATCC CGGCACCGCA GGCTCTTCCT GCCGCCGTGC TGCCTGTTGA GCACAAGTAA
 
Protein sequence
MSQFPLISVM TFLPLLGVVL LFFVPKQSHS AQRGLALLVA LATFVVSLPL VTGFQSNAEF 
QFVEKVPWIA AGPYQMNYHV AIDGISLWLV ILTTFIVPIA ILSTWTAVEN KVKEYMICLL
LLEVGMLGAF VSLDLFLFYI FWEVMLIPMY FIIGIWGGKN KIYAALKFFI YTMVGSLLML
IALVVLYFKG GAGDFSVLRF YDLALDPATQ TWMFLAFALA FAIKVPMFPL HTWLPDAHTE
APTAGSVILA AVLLKMGTYG FVRFAMPLFP DATAQFTPLF AVLSVIGIVY AALVAMVQED
VKKLVAYSSV AHLGYVMLGV FALNQQGLSG GMIQMLNHGV STGALFLIVG FIYERRHTRL
ITDFGGLAKQ MPVFATIFMI VTLSSIGLPG TNGFVGEFLI LIGAYESELR WYAVIGTSGV
ILSAVYMLWM FQRVMFGELN NPKNQTLTDL NAREVVIMLP LLVLIFVMGV YPTPFIDKMS
PSLEKLIVHV KSKQTAKAQI PQIPAPQALP AAVLPVEHK