Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3338 |
Symbol | |
ID | 3740653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3753435 |
End bp | 3753938 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637780628 |
Product | peptide deformylase |
Protein accession | YP_386276 |
Protein GI | 78224529 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCGTA CAATTCTTAC TTATCCCAAC CCGATCCTCA AAAAGAAGGC GGTGCCGGTT GCGGTCATCA ACGACGCGAC CCGTGAACTG GTCCGCGACA TGGCCGAAAC CATGTATGAC GCCCAGGGGG TCGGCCTGGC CGCCCCGCAG ATCGGCGTAA GCCAGCGGGT CATCGTCATT GATGTCTCTC AGCGCGAAGA AAGGCCGGAG CTGATTGTCT GCATCAACCC GGTGTTCGTC CATACCGAAG GGGAATCATA CGAGGAAGAG GGTTGCCTCT CTGTCCCCAA GTACTCCGCC AATGTGCACC GGCACGCCAA GGTTGTCGTT AAGGCGCTCA ATCTCGATGG AGAGGAAGTG ACCTATAGGG CGGAAGGGCT TCTGGCCATC GCTTTCCAGC ACGAGATAGA CCACCTGGAA GGGATGCTCT TCGTGGATCA CCTTTCTCCC CTGAAGCGGG AGATGTTCAA GAAAAAATAC CGCCGCATGG TTGAGGAAGG GTAG
|
Protein sequence | MVRTILTYPN PILKKKAVPV AVINDATREL VRDMAETMYD AQGVGLAAPQ IGVSQRVIVI DVSQREERPE LIVCINPVFV HTEGESYEEE GCLSVPKYSA NVHRHAKVVV KALNLDGEEV TYRAEGLLAI AFQHEIDHLE GMLFVDHLSP LKREMFKKKY RRMVEEG
|
| |