Gene Gmet_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3338 
Symbol 
ID3740653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3753435 
End bp3753938 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID637780628 
Productpeptide deformylase 
Protein accessionYP_386276 
Protein GI78224529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTA CAATTCTTAC TTATCCCAAC CCGATCCTCA AAAAGAAGGC GGTGCCGGTT 
GCGGTCATCA ACGACGCGAC CCGTGAACTG GTCCGCGACA TGGCCGAAAC CATGTATGAC
GCCCAGGGGG TCGGCCTGGC CGCCCCGCAG ATCGGCGTAA GCCAGCGGGT CATCGTCATT
GATGTCTCTC AGCGCGAAGA AAGGCCGGAG CTGATTGTCT GCATCAACCC GGTGTTCGTC
CATACCGAAG GGGAATCATA CGAGGAAGAG GGTTGCCTCT CTGTCCCCAA GTACTCCGCC
AATGTGCACC GGCACGCCAA GGTTGTCGTT AAGGCGCTCA ATCTCGATGG AGAGGAAGTG
ACCTATAGGG CGGAAGGGCT TCTGGCCATC GCTTTCCAGC ACGAGATAGA CCACCTGGAA
GGGATGCTCT TCGTGGATCA CCTTTCTCCC CTGAAGCGGG AGATGTTCAA GAAAAAATAC
CGCCGCATGG TTGAGGAAGG GTAG
 
Protein sequence
MVRTILTYPN PILKKKAVPV AVINDATREL VRDMAETMYD AQGVGLAAPQ IGVSQRVIVI 
DVSQREERPE LIVCINPVFV HTEGESYEEE GCLSVPKYSA NVHRHAKVVV KALNLDGEEV
TYRAEGLLAI AFQHEIDHLE GMLFVDHLSP LKREMFKKKY RRMVEEG