Gene Gmet_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3314 
Symbol 
ID3739405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3729437 
End bp3730426 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID637780604 
Producthypothetical protein 
Protein accessionYP_386252 
Protein GI78224505 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCG CGAGCCGGAT ACCAGCCGCT CCTCTAGAGC AGGAACTCCT CCACCGGGGG 
CACGAATTCT CATTCCTCCA GGTGCTCCGG ATCCTGGAGC TTCTCGGAGA ACGGGACGGG
ACCAAACGGC CCGTGGAGGT GATCCCCCGG CTCTCCCTGG GCTTTCCGGC CGCGGACGTA
GCCGGGGTGG AGCGGGTCGG CGACGGCTAT CGGGTCATTG CCACGTTCCT GGGGCTCTAC
GGCCAGGCGA CCCCGCTTCC CGCCTTCTAC ACCGAGGAAC TTCTCGACGA GGAAGCCACC
GACAGCAGCG CCGGCCGGGA TTTCCTCGAC ATCGTCAACC GGCACATCTA CGGCATCTTC
GCGAATGTTG CCCGGAAATA CCGGCTCTTT CTCCAGGTGG ACGAGCAGCG CAGCGACGCC
GTCACGGAGC GGCTCCACGC CCTCGGGGGG TACGGCGAAG AAACGCTTCG GGCCCAACTC
CCCGATCCCC GGTCGCTCCT GCGCTACACG GGGCTCTTCG CCCAACACCC CCGCTCGGCC
CTGGGGTTGC GGACGCTGCT GACCGATGCC CTCGACGCGC CGGTGGAGGT AATCTCCGCC
GTCCCCCGCA TCGTGACGGT ACCGCCGGAG GAGCGCTCAC GCCTCGGCAC CATCGGCACC
CTCGGCGAGG ACGCCTTTGT GGGCTCCGAG ATCCCCGACC GCTCCGGCAT GTTCCGCATT
GAGGTGGGTC CCTTGCGCCG CGACCGGTTC GCCGAACTCC TCCCCGGCAC CCCGGAGCGC
AAGCGCCTCG ACCTCCTCGT CGCCCTCTAC ATCACCGACC CCCTCGCCTA CGAAATCGAG
CTGATCCTCG CCCCCGGCGA GGCCCCGCCG GCCATGCTCG GCAGCGGCAT TCGGCTCGGA
TGGGATGTGT GGATGACGTC AGGGGCGGAT GTGGGGCGGG TGTCGGTGAG CTTTCCCGGC
GGAGGGGAGC CCCTCGCGGC ACCTCGTTAA
 
Protein sequence
MAAASRIPAA PLEQELLHRG HEFSFLQVLR ILELLGERDG TKRPVEVIPR LSLGFPAADV 
AGVERVGDGY RVIATFLGLY GQATPLPAFY TEELLDEEAT DSSAGRDFLD IVNRHIYGIF
ANVARKYRLF LQVDEQRSDA VTERLHALGG YGEETLRAQL PDPRSLLRYT GLFAQHPRSA
LGLRTLLTDA LDAPVEVISA VPRIVTVPPE ERSRLGTIGT LGEDAFVGSE IPDRSGMFRI
EVGPLRRDRF AELLPGTPER KRLDLLVALY ITDPLAYEIE LILAPGEAPP AMLGSGIRLG
WDVWMTSGAD VGRVSVSFPG GGEPLAAPR