Gene Gmet_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3309 
Symbol 
ID3739400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3724596 
End bp3725057 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID637780599 
ProductNUDIX hydrolase 
Protein accessionYP_386247 
Protein GI78224500 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC ATGATTCCCC TGTTCACATC GTTGTCGTAG GGTGTTTGAT TCGAAACGGG 
CTCGGCGAGA TCCTGTTGAT CCGGCACCAT AAACGTGGCT GGGAAATCCC GCAGGGGCGT
GTCGAGGCAG GGGAGGGGAT TGTCGACGCG CTTCGCCGGG AGGTGAGAGA GGAGACGGGG
GTCGAGATCA AACCGGGACC CCTTACTGCC GTCTGGTCCA AGGTTTCACC CCCTGCGTCG
CTAATCCTCA CGTTTCTGGC GGACTATGCG GAGGGTGAAC TGGCTCCCAG CGATGAAACG
CCGGAGCTGG GGTGGTTTAG CGAGCGCGAA GGGGTGGAGC TGGTTGCTCA TCCCGTGACC
CGGGACCGGC TCAGGGCGCT TCTTGACTAT TCGGGAACCG TTGCCTGTTT CTCGTACGCA
ACCAATCCAT ACAAGCTTTT GGGAAGTTTG GGGGAGCCAT AG
 
Protein sequence
MSTHDSPVHI VVVGCLIRNG LGEILLIRHH KRGWEIPQGR VEAGEGIVDA LRREVREETG 
VEIKPGPLTA VWSKVSPPAS LILTFLADYA EGELAPSDET PELGWFSERE GVELVAHPVT
RDRLRALLDY SGTVACFSYA TNPYKLLGSL GEP