| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3285 |
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| Symbol | |
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| ID | 3741006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3694914 |
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| End bp | 3696743 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637780575 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_386223 |
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| Protein GI | 78224476 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG GTGAACCTCG AAACGGAAAA CAGGTTGTCA TGGATCAAGA GGAAATAATG
GAGAGAAACG GCGCTTCTGA AAATATGCAC AAAAAGGCCG GGGAGGCTGG AATTATCCGA
CTTGACGCCG AACTGGGGAT CGTCTCCCTG GACGAAACCT CCGGAAGCCT GATCGGAAGC
CCTCCCGAAT CTCTTCTGGG ACGGAGAATC GACGGGATAG TCGACTTGGC GAACCTGGGC
AAACTGATGC ACAACGGCAT CAGCTTCAGC AATCAGGTCA TCGTTGCCGG TGACCGGCGT
CTCGCCTGCG ATTACGTCCC CATCGTGGAG GATGACAGGA TTGTCGGCGG AGTATTGACG
GTACTCGGCG TACTCCCCAA GGAGACCGAC GGCTCTTCGG ACGACCTCAA GGAACTTCTT
CGCTCTGCCG GCGCTTTCAT GGACCTCGAC TATCACGGCA TCATCATCCT CGACCGCAAC
GGCACGGTCG TAATGGTAAA CCAGTCCTTT GCCGAGGTGC TCGACGCCAC CCCGCAGACC
ATGATCGGCA AGCATGTCCA TCAGGCTTAT CATAATTCAC AACCCTCCCG GATGCCGGTC
GTGATGGAAA CCGGCAAACC GGAGATCAGC TCCCACTACA TGAACGGCAA AGAGGTCTTT
GCCAGCCGCT ACCCTCTTAT CAAGCAGGGG AAAGTGATCG GTTGCGTGGG AAAGATTCTT
TTCAAGGATG TCCGCGAGAT CTCACTCCTC GCGAATCGGC TGCAGAGTGC CCGAGAGAAA
AAAACTCCCG CGAGAGCAAT TGCGGAAAAA GGTTCCCTTT TCAAATACGA CATTGACAGC
ATTGTGGGGC AGAGCGCCAA AATCGCCGAA CTGAAGGAGA CCCTTCTCAG GGTAGCCCCC
AAGAACTCCA ACGTTCTCTT GAGGGGAGAG AGCGGGACGG GGAAGGAACT CTGCGCCCAT
GCCATCCACG CTGCCAGCAC ACGACGCTAC GCCCCCTTCG TCAAGGTGAA CTGCGCCGCC
ATCCCTGACC ACCTCCTGGA ATCGGAACTC TTCGGTTACG CGGACGGGGC CTTTACCGGG
GCCAAAAAAG GAGGGCAGGT CGGCAAGTTC GAGCTGGCCG ACACCGGCAC CATCTTTCTT
GACGAGATCG GTGACATGCC CCTTGCCATG CAGGCAAAAC TTCTCCGAGT TCTTCAAGAG
CGGGAACTGG TCCCCTTGGG AAGCACCGTC CCAAAGGTAG TTGATGTGCG AGTCGTGGCG
GCAACCAACA GCAACCTCGA ACAGTTGGTC AGCGAAGGGA AATTCAGGGA GGACCTCTAT
TATCGGCTTA ATGTGGTCGC CCTTACCATT CCTGCGCTGA AGGACAGAAT GGAAGACATC
TACATCATCA CGAAAAATTT CATTGATCAT TTCAACGCTG AATTCGGCCT CTCCGTCCAG
GGAATCGACA GTGAAGCGTG GGAGGTCCTC AAGCACCACA ACTGGCCCGG CAATATCCGC
GAGCTTCGCA ACGTGCTCGA AAGCGCCTTC AATGCAGTAA GCGGCCCTCT CATCACCAAA
GAAAACCTCC CAATCCGTCT CGCCCAACTC TGCCCACATT CCACGCTGCC CCATGAGTTT
GCGCCTGGAG AGGATCTGGA AAGTTACATT CGACAGCACC TGGGAAAGAA AAACATTAGT
GATATGATGG ACGACCTTGA ACGGGTAATC CTGGAAAAAG CCCTTGAAAT CTGCAACGGC
AACAAGCTCC ACGCCGCTCA ACTCCTCGGC ATATCCCGCC CAGGTCTCTA CAAAAAGCTC
CAGAAGTACC CCTCACTGGA AAAAACATAA
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| Protein sequence | MQAGEPRNGK QVVMDQEEIM ERNGASENMH KKAGEAGIIR LDAELGIVSL DETSGSLIGS
PPESLLGRRI DGIVDLANLG KLMHNGISFS NQVIVAGDRR LACDYVPIVE DDRIVGGVLT
VLGVLPKETD GSSDDLKELL RSAGAFMDLD YHGIIILDRN GTVVMVNQSF AEVLDATPQT
MIGKHVHQAY HNSQPSRMPV VMETGKPEIS SHYMNGKEVF ASRYPLIKQG KVIGCVGKIL
FKDVREISLL ANRLQSAREK KTPARAIAEK GSLFKYDIDS IVGQSAKIAE LKETLLRVAP
KNSNVLLRGE SGTGKELCAH AIHAASTRRY APFVKVNCAA IPDHLLESEL FGYADGAFTG
AKKGGQVGKF ELADTGTIFL DEIGDMPLAM QAKLLRVLQE RELVPLGSTV PKVVDVRVVA
ATNSNLEQLV SEGKFREDLY YRLNVVALTI PALKDRMEDI YIITKNFIDH FNAEFGLSVQ
GIDSEAWEVL KHHNWPGNIR ELRNVLESAF NAVSGPLITK ENLPIRLAQL CPHSTLPHEF
APGEDLESYI RQHLGKKNIS DMMDDLERVI LEKALEICNG NKLHAAQLLG ISRPGLYKKL
QKYPSLEKT
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