| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3279 |
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| Symbol | |
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| ID | 3740999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3688154 |
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| End bp | 3689980 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637780568 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_386217 |
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| Protein GI | 78224470 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00154728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTC AGAATCAATT CAAGATAGCC AGCAATGCGA TTCGGATAGC CAACTCCACC
GAACACCCTC ACCATGTCCG GCTGAAAGCC TTCGCGCACC TCATTACCGA AGCCTTCCAC
TGCTCATCGG CGACCATCTA CCTGGCCGAC GAGAGAGACC ACCTGCTCCA CCGAAAGATA
TCCACTCTCC TCCCCGACGA AATCAGCGAT TGCATTATCC CCTTCGGCAA GGGAGTTGCA
GGACGATGCG CGGCGCATGC CAGACCAATC TACCGCGGAA TCTCGTCATT GCACCCCCAC
GAGCCCTCCC TGGGCACCGA ACACCAAGTA CATGCCCACC CCATCATCGA CGGAGAGCGA
CTGCTGGGGG TCCTGACCAT CGGCCTCCCC GACACCACCC TTCTCGACGG GGAGGATCTC
GAACTTCTGC AGGTCCTCTT GATCGAGGCC GCCGGCATTA TCCGCCGCAA GCGCTCCCGC
GATGACATGA ACAAGCGGCT TGAGGAGTTT TCTTTCCTCT ACCGCATCAG CAACGCGATG
CTCTCCACCA TCAAGCTGAA CCGACTCGTG CACCTGATTC TTTCAGCCAT CACGTCGGGG
ACCCCCCCTG TTTTCGACCG TGCCATGCTC TTTCTGGCCA ACGAACGGAC CGAGATCCTC
CAGGGAATGA CCGGCATCGC CCGGGCCGGG GGACCTGAAC CGCCGGCGGA CCTGCCACCC
GCCCCCACGC CGGATTCCCT GAACGTATCA GACGAAGAGA TTGCCCTCCT ACAGCAAACC
GAATTTTGCA GACTTGTCAA GGCGACGCGG CTTCCCCTGG ACAGCACCCA GAACCACATC
TCCAAGGCAG TGCTCGACAG GCAGCTGGTC CTTGTCCGCG CCCCCCGTCG CGAATCCCCC
ATTGACCGAT CCTTCAACCG GAAGTTCGGC GGTACCCCAT TCGCCATCGC CCCACTCATC
GCCCACAATC AGGTCATCGG CGCCATCGTC GTCGACAACT GCACCAGCGG ACGCCCCATC
ACCCCCGATG AACTCAATCT GCTGCAACTG TTCACCAACC AGGCGGGAAT GGCGGCGGAA
AACTCCATCC TCTACAACCG GCTCGAAGAA ACCAACCGCA ATCTCCACGA GACCCAGGAG
CGCCTCCTGC AGGGGGAGAA ACTGGCTGCC ATCGGCCAGA TGGCCGCCGG AATCGCCCAC
GAGATCAAGA ACCCTCTCGT TTCGGTAGGG GGCTTTGCGG GACGGCTGAA AAGGAGATTC
CCCGCCGATA CCGAGGAATG GCAATACGCG GATCTCATCA CCCGTGAAGT CCAGCATCTG
GAAACCATGC TGACCGACAT CCTCTTCTTC TCGAAGAAGA CGACCATCTG CTACAGCCGG
TGCAGCATTA ACCAGATTAT CGAAGACGCC CTCTCGGTGG TCGCTCTCCC CATCGAGGAA
AAAGGAATTA AGGTTGAAAA AATCCTGGCA TCGCGCCTCC CCTCGGTCCT GGGCGACTAC
CAGCAGATCC GCCACGTTTT CATCAACCTG TTCAGCAACG CCAATGACGT CATGGAGCCT
GGGGGCGTCC TGGAAATCGA GTCCCTCCCC GCCCAGATCG ACGGAAGCCG AGCCGTCTCA
GTCAAGGTTT CCGACACAGG AGCAGGGATT CTCCTTGAAC ATATCCATAC CCTCTTCAGC
CCCTTCTTCA CCACGAAGGA AAAAGGGACC GGCCTCGGTC TGGCTATCGC CCACAAGATC
ATAACGGCCC ATGGAGGCAC CATCACGGTT AAAAACCGCG AGACCGGAGG AGCTGAATTC
ACCGTCGTCA TCCCGGTATC CCCCTAA
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| Protein sequence | MAAQNQFKIA SNAIRIANST EHPHHVRLKA FAHLITEAFH CSSATIYLAD ERDHLLHRKI
STLLPDEISD CIIPFGKGVA GRCAAHARPI YRGISSLHPH EPSLGTEHQV HAHPIIDGER
LLGVLTIGLP DTTLLDGEDL ELLQVLLIEA AGIIRRKRSR DDMNKRLEEF SFLYRISNAM
LSTIKLNRLV HLILSAITSG TPPVFDRAML FLANERTEIL QGMTGIARAG GPEPPADLPP
APTPDSLNVS DEEIALLQQT EFCRLVKATR LPLDSTQNHI SKAVLDRQLV LVRAPRRESP
IDRSFNRKFG GTPFAIAPLI AHNQVIGAIV VDNCTSGRPI TPDELNLLQL FTNQAGMAAE
NSILYNRLEE TNRNLHETQE RLLQGEKLAA IGQMAAGIAH EIKNPLVSVG GFAGRLKRRF
PADTEEWQYA DLITREVQHL ETMLTDILFF SKKTTICYSR CSINQIIEDA LSVVALPIEE
KGIKVEKILA SRLPSVLGDY QQIRHVFINL FSNANDVMEP GGVLEIESLP AQIDGSRAVS
VKVSDTGAGI LLEHIHTLFS PFFTTKEKGT GLGLAIAHKI ITAHGGTITV KNRETGGAEF
TVVIPVSP
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