| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3262 |
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| Symbol | |
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| ID | 3741246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3671554 |
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| End bp | 3672150 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637780551 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_386200 |
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| Protein GI | 78224453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.205126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000000000286118 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCTCG ACATGATGCG GAGCGCCTTC ACTCTTGGCG ACTCCGAAGG TGGGGGGAAT
CCGCCGGCAA TGGGGCGTGC CGTGGAATTC ATGCTCAAGA GCTTTGCCGA AAACAGCCGG
GAACCTGTTG ATCCGGCATC TCCCGTGGCT GCCGGGGGAT CTTCTGCTGC CCCGGTTGCT
TCTGCCGCTC CCGAGCCTCT GCCCGCAAAG GGCAGTGGCA ACTGGCTCGA CGACGTCGTC
AATCGTGCTT CACGCCGCCA TGGCGTCGAG GTTGGACTCA TCAAGGCAGT CATCAAGGCC
GAAAGCAACT TCAATCCCAA CGCCGTCTCC CCGGTGGGCG CCCAGGGGCT CATGCAGCTC
ATGCCTGCCA CCGCCAAGGG ACTCGGGGTC ACCAACTCCT TCGATCCCGA GCAGAATGTC
ATGGCCGGCA CAAAGTTTCT CAAGGATCTC CTGGCCCGTT ACGGCGGGAA TGTGGACAAG
GCCCTTGCCG CCTACAATTG GGGGCCGGGC AATGTCGATC GCAAGCCCCA TCTCCTTCCC
CGGGAAACCC GCGAATATCT TGCCAAGGTG AAAGATTACT ACAATCAGTA CGCCTGA
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| Protein sequence | MRLDMMRSAF TLGDSEGGGN PPAMGRAVEF MLKSFAENSR EPVDPASPVA AGGSSAAPVA
SAAPEPLPAK GSGNWLDDVV NRASRRHGVE VGLIKAVIKA ESNFNPNAVS PVGAQGLMQL
MPATAKGLGV TNSFDPEQNV MAGTKFLKDL LARYGGNVDK ALAAYNWGPG NVDRKPHLLP
RETREYLAKV KDYYNQYA
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