Gene Gmet_3253 details

Gene Information

• Locus tag: Gmet_3253
• ID: 3741272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter metallireducens GS-15
• Kingdom: Bacteria
• Replicon accession: NC_007517
• Strand: +
• Start bp: 3662111
• End bp: 3662515
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637780540
• Product: methylmalonyl-CoA epimerase
• Protein accession: YP_386191
• Protein GI: 78224444
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR03081] methylmalonyl-CoA epimerase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00000018375
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 3.27573e-17
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCTCACCA AAATCAACCA TATCGGCATC GCCGTCCAAT CCCTCGCCGA CGCCGTTCCC 
TTCTACCGCG ACAACCTCGG CATGGCCTTC ATGGGCACCG AGGAAGTTCC GGAGCAGAAG 
GTCACCGTGG CCTTTTTCCA GATCGGTGAA TCGAAGATCG AGCTCCTGGA GCCCACATCC 
GACGACAGCC CGGTGGCGAA GTTCATCGAG AAGAACGGCG CCGGCATCCA CCACATCGCC 
TACGAGGTGG AGGACATCGA AGCGGCCATC GCCAGGCTCG TGGCCGACGG CGCCCGGATG 
ATCGACAGCG TGCCGCGAAA CGGCGCCCAC GGCGCCCGCA TCGCGTTCAT CCACCCTAAA 
ACAAGTCGTG GGGTCCTGAC CGAACTCTGC CAGATGGGGC ACTGA 

 

Protein sequence

MLTKINHIGI AVQSLADAVP FYRDNLGMAF MGTEEVPEQK VTVAFFQIGE SKIELLEPTS 
DDSPVAKFIE KNGAGIHHIA YEVEDIEAAI ARLVADGARM IDSVPRNGAH GARIAFIHPK 
TSRGVLTELC QMGH