Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3247 |
Symbol | |
ID | 3741266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3653676 |
End bp | 3654239 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637780534 |
Product | XRE family transcriptional regulator |
Protein accession | YP_386185 |
Protein GI | 78224438 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00000592797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGAAT ACAACATCGG GGCCAAGATC AAAAAGCTCC GTCTGGCCAA GAAGCTGACT CTCCAGGCGG TCGCCCGAGA AACAGGCTTT TCCCCCGCCC TCATATCCCA GATCGAGAAC AACAACGTCT CCCCTCCCAT CGCGACCTTG TCCAAGATCG CAAAATTCTT CGACGTTAAG ATCAGCCTCT TCTTCTCCGA GGATGAAGAG GAATACCGCT ATGAGGTGGT TCGCCGGGGC GAGCGCAAGG TGATCCCCCG GGTCATCTCC CGGGCCGGCA CCAGCCAGGG GTACTCCTAC GAGTCACTCT CCTTCCGCAA GCAGAACAAG AAGATGGAAC CCTTCCTCCT CACCGTCACC GAAAAGGCCG CCGAGGAGAA CACCTACAGC CATGATGGCG AAGAGTTCCT CTTTGTCATG AAAGGGACTG CGGAGCTACT GCTCGAAGAC GAACGGATCG CCCTCGAAGA GGGGGATTGC GTCTACTTCG ACTCGTCCCT CAGACACCGA CTCCTCTCCA GGGACGGAAA CGAAGTCCAA GTGCTGGCGG TGGTTACCCG CTAA
|
Protein sequence | MSEYNIGAKI KKLRLAKKLT LQAVARETGF SPALISQIEN NNVSPPIATL SKIAKFFDVK ISLFFSEDEE EYRYEVVRRG ERKVIPRVIS RAGTSQGYSY ESLSFRKQNK KMEPFLLTVT EKAAEENTYS HDGEEFLFVM KGTAELLLED ERIALEEGDC VYFDSSLRHR LLSRDGNEVQ VLAVVTR
|
| |