| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3245 |
|---|
| Symbol | |
|---|
| ID | 3741264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3650590 |
|---|
| End bp | 3651969 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637780532 |
|---|
| Product | FAD linked oxidase-like |
|---|
| Protein accession | YP_386183 |
|---|
| Protein GI | 78224436 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0000203504 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA ACCGCATCAT CGATGAACTG AAAACCATCG TCGGCGCCGA CAACGTGGCC
ACCGACCGCC AGGACCTGAT CTGCTACGGC TACGACGCCA CCCAGATGGA ATTCCTCCCC
GACGCCGTGG TTCACCCCGG CAGCCCCGAC GAGGTTTCCG CGGTGCTGAA GCTGGCCAAC
CGAGAGCAGT TCCCGGTCTA TCCCCGGGGG GCCGGCAGCG GCTTCACCGG CGGGGCGCTC
CCCAAGGGGG GCGGTATTGT CCTCGTCGTC ACGCGGCTTA ACCGCATCCT CCGCATCGAC
ACCGAGAACC TCATCGCCGA GGTGGAGCCC GGCGTAGTCA CCGAGCAGTT CCAACTGGAG
GTGGAAAAGC TGGGGCTCTT CTACCCGCCG GACCCCGCAT CCCTCAAGTT CTCCACCCTG
GGGGGAAACG TGGCCGAGAA CGCCGGCGGT CCCCGCTGCG TGAAGTACGG TGTCACCCGG
GACTTCGTCA TGGGGCTCGA AGTGGTCCTT CCCTCCGGCG AGATCATCCG CACCGGGGGC
GAGACCTACA AGGGGGTGGT GGGGTACGAC CTAACCCGGC TCCTCTGCGG CTCCGAGGGG
ACCCTCGGCG TCATCACCAA GATCATCTTC AAGCTCCTGC CGTTGCCAGA GGCGAAGAAG
ACCATGATGA CCATCTTCGA CTCCATCGAC GGCGCCGCCA AGGCGGTCTC CACCATCATC
GGCAACAAGA TCATCCCCAC GACCCTGGAG TTCATGGATC ACGCCACACT CCAGTGCGTG
GAGAAGCGCT TCAACCTGGG GATTCCGGCC AGCGGCCGAG CCGTCCTCAT TATCGAAGTG
GACGGCGACC GGGACCTGAT CGAGAAACAG GCGGCCCGCA TCCAGGAATT GATCAAACCG
CTGGGATTGG TTGAGTGCAA GATCGCCAAG GACGCCGCCG AATCCGAGGC CCTCTGGAAG
GTGCGGCGGC TGGTGTCGCC GTCCCTTCGG GACGTGAACC CGGACAAGTT CAACGAAGAC
ATCGTGGTCC CCCGCTCGAA GGTGCCCGAC GTTATCCGGG TGATCGAGAA GATTCAGCAG
AAGTACGCGA TCCCCATCGT CAACTTCGGC CATGCCGGCG ACGGCAACAT CCACGTCAAC
ATCATGATCG ACAAGTCCGT GGCCGGACAG GAAGAGAAGG CCCACGAGGC CATCGCCGAG
GTGTTCCAGG CGGCCCTTGA CCTGAACGGC ACCATGTCCG GCGAGCACGG CGTGGGGCTC
GCCAAGCAGC CCTACATCCA CCTGGAGCTG AAACCGGCCC AGGTGGCGAC CATGCAGGCC
ATCAAGAAGG CCCTGGACCC CAACAACATC CTCAATCCGG GGAAGATGTT CCCGGTGTAA
|
|---|
| Protein sequence | MLDNRIIDEL KTIVGADNVA TDRQDLICYG YDATQMEFLP DAVVHPGSPD EVSAVLKLAN
REQFPVYPRG AGSGFTGGAL PKGGGIVLVV TRLNRILRID TENLIAEVEP GVVTEQFQLE
VEKLGLFYPP DPASLKFSTL GGNVAENAGG PRCVKYGVTR DFVMGLEVVL PSGEIIRTGG
ETYKGVVGYD LTRLLCGSEG TLGVITKIIF KLLPLPEAKK TMMTIFDSID GAAKAVSTII
GNKIIPTTLE FMDHATLQCV EKRFNLGIPA SGRAVLIIEV DGDRDLIEKQ AARIQELIKP
LGLVECKIAK DAAESEALWK VRRLVSPSLR DVNPDKFNED IVVPRSKVPD VIRVIEKIQQ
KYAIPIVNFG HAGDGNIHVN IMIDKSVAGQ EEKAHEAIAE VFQAALDLNG TMSGEHGVGL
AKQPYIHLEL KPAQVATMQA IKKALDPNNI LNPGKMFPV
|
|---|
| |