Gene Gmet_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3240 
Symbol 
ID3740956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3646784 
End bp3647230 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID637780527 
Productferric uptake regulator family protein 
Protein accessionYP_386178 
Protein GI78224431 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000000230922 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00191408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTGTC CTCTTGCATT CAAAAAGGAA AAACTCCGCC ACCTTGAAGA CGGCTGCCGC 
CAAAACGGCC TCGCCATGAC CGTCCAGCGC CGCGTCGTCC TGGACGCCCT TGCGGAGCGC
ACGGACCACC CATCCGCCGA CCAGCTCTAC GATGCGGTCC GCGGAAGGCT CCGGGGAATT
TCCCGCACCA CCGTCTATCG GGTTCTGGAA ACCCTCGTGG GAATCGGCGT TGTCCAGAAG
ATCAGCAACC CCGAGTCCAA GGCCCGGTAT GATGCCAATA CGGTGCGCCA TCACCACATC
CACTGCATTC GCTGCGAAAA GATCGAGGAC ATGCACACCC CGGCCCTTCA CCTCGCGCAG
CAGGTGCCCA TCGCCACGGA AAGCGGCTTT ACCATCGTCG ACTATTCCAT CAACTTCAGC
GGGATCTGCC CCGACTGTCG TTCATGA
 
Protein sequence
MDCPLAFKKE KLRHLEDGCR QNGLAMTVQR RVVLDALAER TDHPSADQLY DAVRGRLRGI 
SRTTVYRVLE TLVGIGVVQK ISNPESKARY DANTVRHHHI HCIRCEKIED MHTPALHLAQ
QVPIATESGF TIVDYSINFS GICPDCRS