| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3238 |
|---|
| Symbol | |
|---|
| ID | 3740954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3643911 |
|---|
| End bp | 3644408 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637780525 |
|---|
| Product | rubrerythrin |
|---|
| Protein accession | YP_386176 |
|---|
| Protein GI | 78224429 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1633] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00000130067 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0238915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGGG AGTATTCGGT TCAGGAGGCC CTGAAGCTCG CCATCAAGGG CGAAAAGGAC
AGCATGGACT TTTACCGCAA GGCCGCTTTG GTGACCAGGA ATGAACGAGC GCAGAAGGTC
TTCGATCTTC TGGCCAACGA GGAGGTGGGA CACCTCAAGG CATTCTTCGA CCACTACAAG
GGAGGAGAAT TCGGCAGCGT GGCCGACTAC ATGGCACAGC CCCCGGACAC CAAGAACCCC
ACGTACGTTG CCCTCATGAA GGCGGTCAAC GAGGAGACCC CCGAGCAGCA GGCCCTCGAA
CTGGCCCTCA GGGAGGAGAA GTCCTGCATC GACCAGTACA CGGTCCTTGC CAGGGACCTC
ATCGATCCCC TTGTCAGATC CATCTTCGAG CAGGTCATCA AGGAGACCGA AAAGCACCTG
GCAATGATCG AAGAGGAGTA CCGCCACGTC ATGACCATGG TCCACGAGTC GGATCAGGAC
ATCTACGTGC GGGAGTGA
|
|---|
| Protein sequence | MTREYSVQEA LKLAIKGEKD SMDFYRKAAL VTRNERAQKV FDLLANEEVG HLKAFFDHYK
GGEFGSVADY MAQPPDTKNP TYVALMKAVN EETPEQQALE LALREEKSCI DQYTVLARDL
IDPLVRSIFE QVIKETEKHL AMIEEEYRHV MTMVHESDQD IYVRE
|
|---|
| |