| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3235 |
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| Symbol | |
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| ID | 3740951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3640496 |
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| End bp | 3642037 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637780522 |
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| Product | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase |
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| Protein accession | YP_386173 |
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| Protein GI | 78224426 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0761379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.140873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATA AATCCCTCAA AAAACCGTTC GTCCACCTCA TCGGTGCCGG CCCCGGCGAC
CCGGGGCTCA TCACCGTCAA GGGTCGGGAG TCCCTGGGAA GAGCCGACGT GGTCATCTAC
GACTACCTGG CCAATGACGA CCTCCTCCGC TTCGCACGGC CCGACGCCGA GCTGATCTAC
GCCGGCAAGA TCGGCGGGCA CCACAACCGC GAGCAGTGGC AGATCAACGC GCTCCTGGTG
GAAAAGGCCC TGGCGGGGAA TGTGGTGGCA CGACTCAAGG GGGGTGACTC CTTTGTCTTC
GGCCGGGGGG GTGAGGAGTG CGAGGCCCTT GTGGCGGCGG GAATCCCCTT TGAGATCGTC
CCCGGCGTCA CGGCCGGGAT CGGCGTCACT GCCTACGCCG GCATCCCCCT CACTCACCGG
GGGGTGACCA CTTCCGTCAC CTTCGTCACC GGCCATGAGG GGCACGACAA GGAGGTCTCC
CAGATCGACT GGGAGGGTCT CTCCCTGGGG AGCGGCACCG TAGTCTTCTA CATGGGGATC
AAGAACCTCC CCCAGATAAC GGCAAACCTC ATGGCCCACG GCAGGCCGCC GGAGACCCCG
GTCGCCCTCA TCCGCTGGGG GACTCGGCCC GAGCAGGAAG TACTCACCGG CACCCTGGCC
GACATCGCCG AGCAGGCACG GCGGACCGGC TTCCGGGCCC CGGCCATCAC CGTGGTGGGA
GAGGTGGTGC GCCTGCGGGA GAAGCTCCGC TGGTTCGACA ACCGTCCCCT CTTCGGCACA
AGCATCCTCG TTACCCGTGC CGCGGACCAG GCAGGCGAGT TCGGTGCCAT GCTCGGGGCA
CTGGGGGCCC GGGTCCTGGA GTGCCCCACC ATTGCCATTG TCCCCCCCGA AAGCTGGGAC
AACCTCGACG CAGCCATCGC CTCTCTGGAT CGGTTCCACT GGGCCGTCTT CACGTCGGTC
AACGCGGTCC GTTTCTTCTT TGAGCGACTC GCCGCAGCCG GAAAGGACTC CCGCGCCCTG
GGGAACTGCC GCGTCTGCGC CGTGGGGCCC AAGACGGCAG CAGCCCTGGC CCCCTTCGGC
ATCCGACCGG ACCTCATTCC GGCCGACTAC AAGGGTGAAG GGGTGGTGGA GGTGTTCCGC
TCGGAGGAGA TTGCAGGGAA ACGGATCATC TTCCCCAAGG GAGACCGGGC CAGGGACGTG
ATCCCCCAGG GCCTCGCGGA GCTGGGGGGA GAGGTGACCG CGCCGGTCGC CTACCGCAAC
GTGACGCCCG ACTCCCTTCC CGCCGGCGTC ATCGCCGAGC TGGAAGAACG GCGCATCACC
TGCGTCACCT TCACCTCGTC ATCCACCGTG GAGAACCTGG CCGCCATCCT CGGGGAGAAC
CGCTTCCTCC ACCTCCTGAA GGGGGTGACG ATCGCCGCCA TCGGCCCAAT CACCGCCAGA
ACCTGCCGGG AACTGGGGCT TGAGGTTCAC GTGGAGCCCT CGAAGTACAC CCTCGCTGCC
ATGACGGACG CCCTCGTCGA CTTTTTTTCA CGGTCGAAGT AG
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| Protein sequence | MPDKSLKKPF VHLIGAGPGD PGLITVKGRE SLGRADVVIY DYLANDDLLR FARPDAELIY
AGKIGGHHNR EQWQINALLV EKALAGNVVA RLKGGDSFVF GRGGEECEAL VAAGIPFEIV
PGVTAGIGVT AYAGIPLTHR GVTTSVTFVT GHEGHDKEVS QIDWEGLSLG SGTVVFYMGI
KNLPQITANL MAHGRPPETP VALIRWGTRP EQEVLTGTLA DIAEQARRTG FRAPAITVVG
EVVRLREKLR WFDNRPLFGT SILVTRAADQ AGEFGAMLGA LGARVLECPT IAIVPPESWD
NLDAAIASLD RFHWAVFTSV NAVRFFFERL AAAGKDSRAL GNCRVCAVGP KTAAALAPFG
IRPDLIPADY KGEGVVEVFR SEEIAGKRII FPKGDRARDV IPQGLAELGG EVTAPVAYRN
VTPDSLPAGV IAELEERRIT CVTFTSSSTV ENLAAILGEN RFLHLLKGVT IAAIGPITAR
TCRELGLEVH VEPSKYTLAA MTDALVDFFS RSK
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