| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3232 |
|---|
| Symbol | |
|---|
| ID | 3740948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3637343 |
|---|
| End bp | 3638158 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637780519 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_386170 |
|---|
| Protein GI | 78224423 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00268584 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.260264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC TGTTCTTCAA ACTGACCCTG GCCATCTACT TCGCAGCCAC CATTGCCTAC
CTGGCTTACC TCGTCAAACC CCGGGAAGTA CTCGGCAAGG TTTCCTGCTG GATTCTCTCG
GCGGGGTTCG TGGCTCACTG TGCCTACACG GTCGACCGGT ACCTGGAGGC GGGACACACT
CCCATCACCA ACCTCCACGA GTCCCTCTCC TTCTTCAGTC TTGCCGTTGT AGGCATCTAC
ATCCTCTTCG AGCGGAAATA CCGGATCTTC ATCCTCGGCT CCTTCGTCAC CCCTGTGGCA
TTCCTGCTCA TGGCGGCCTC CACCGGCTTT CCCTCGGCCA TCATGCCGTT GAATCCGGCC
CTCAAGAGCA AATGGCTCAT GGTCCACACG GTCATGGCGT TCCTGAGTTA CGCCGCCTTC
TCCGTTGCCT TTGGCGCCGC CATCATGTAC CTGATCCAGC AGCATTTCCT CAAGAGCAAG
AAGCTGGGCC CCATGTACCA GAAGCTTCCT TCCCTGGACA TACTGGACGA GATCAACTAT
CGCTGCCTCA CCATCGGGTT CCCGCTTCTC ACCTTCGCCA TCATCTCGGG TGCCATCTGG
GCTGAATCCG CGTGGGGAAC CTACTGGAGC TGGGACCCGA AGGAAACCTG GTCCCTCATC
ACCTGGTTCG TCTACGCGGC GCTGCTCCAC GGCAGGCTAA CCACCGGATG GAGGGGAAAG
AAGGCCGCCA TTCTCGCCAT TGTCGGCTTC TTCGTCCTCC TGTTCACCTT CCTCGGCGTG
AACCTGTTCC TGTCGGGGCT GCACAGTTAC AAATAA
|
|---|
| Protein sequence | MNALFFKLTL AIYFAATIAY LAYLVKPREV LGKVSCWILS AGFVAHCAYT VDRYLEAGHT
PITNLHESLS FFSLAVVGIY ILFERKYRIF ILGSFVTPVA FLLMAASTGF PSAIMPLNPA
LKSKWLMVHT VMAFLSYAAF SVAFGAAIMY LIQQHFLKSK KLGPMYQKLP SLDILDEINY
RCLTIGFPLL TFAIISGAIW AESAWGTYWS WDPKETWSLI TWFVYAALLH GRLTTGWRGK
KAAILAIVGF FVLLFTFLGV NLFLSGLHSY K
|
|---|
| |