| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3223 |
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| Symbol | |
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| ID | 3740939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3623160 |
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| End bp | 3626387 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637780510 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_386161 |
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| Protein GI | 78224414 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.124845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTACG TTGCCGATCT TCACGTCCAT TCTCCCTTTT CGCGGGCCAC GAGCCGGGAG
TGTGATCCGA CCGGCCTTGC CGCCTGGGCC CGGGTGAAAG GGATTCAGGT TCTGGGGACC
GGCGACTTCA CCCATCCCGG CTGGTTCCGT CTCCTGAGGG AGACCCTCGT GCCGGCGGAG
CCAGGGTTCT TCCGGCTGCG GGAGGGAACG GTCCCCTCCC CCCTGCCGGG GCTCCCCCCC
TCATCGACGC CGGTCCGCTT CGTCCTTTCT GCAGAGATCA GCTGCATCTA CAAGCGCCAC
GGTGTGGTCC GCAAGGTCCA CAACCTCGTC TACGTTCCGG ATTTCGCCTC GGCGGAGCGT
CTTGCCGCGC GGCTAGCGGG CATCGGCAAC ATCGAGTCGG ACGGCCGCCC GATCCTCGGC
CTCGACTCCC GGGATCTCCT GGAAATCGTC CTTGAGGAGG CACCCGAGGG GTTCCTCGTC
CCGGCCCACA TCTGGACCCC GTGGTTTTCC CTCTTCGGTT CCCGGTCCGG CTTCGACACG
GTGGAGGAGT GCTTCGGCGA CCTCTCTCCC CACGTCTTCG CCCTAGAGAC CGGCCTCTCC
TCCGATCCTG ACATGAACCG GATGATATCG GCCCTGGACC GTTTCACCCT CATCTCCAAT
TCCGACTGCC ACTCCCCCTC TCGGCTCGGC CGGGAGGCGA ATCTCTTCGC CACTGGCTTC
GATTTTTTCT CGCTCCGCGA CGCCCTGAAG TCGAATCACC GCGATACCTT CCGGGGGACC
GTTGAGTTTT TCCCCGAGGA GGGGAAGTAC CACCTGGACG GCCACCGGGC CTGCTCGGTC
TGCCTTGAGC CGGAGGAGAC CCGGCGCCTC GACGGCCGCT GCCCCGCCTG CGGCCGCCCC
CTCACCGTGG GGGTCCTCCA CCGGGTGATG GAACTGGCCG ACCGGGAGCA CCCCCTGTTT
CCTCCTGATG CGCCGGAGTT TTTCAGTCTC GTGCCCCTCC CCGAGGTGCT GGGGGAGATC
CTTGGCGTCG GCCCGGGCTC CAAGGAGGTG TTGCGCCAGT ACGGACGCCT TATGGCCCGC
TTCGGCTCGG AGTTTGGACT CCTGCTCCAC ACGCCTCCGG AGGAGATTTG GGAGGTGGCG
CCCCTGGTGG CCGAGGCGGT GACCCGCATC CGGTCAGGAC GGGTCATCCG GCACGGGGGG
TACGATGGAG AGTTTGGGAC GATCCGGGTC TTCGAGGAGG GGGAGGTGGC GCGCCTCTCG
GGCCAGGCCG GCCTCTTCGC CGACGATCCC CCCCGACGGA GCCGTCGGAA AGAACCGCCG
CAGCCCCTCG CCCCGTCCGT TCGCAAGGAC GTTACGGCAA GCGATTCCCC ACCCGGAGGG
CCGAACCCCG AGCAGGCCGA GGCGATCGGC TGTGCCGACC GGCAGGTGCT GGTGGCGGCC
GGACCGGGCA CCGGCAAGAC CTACACCCTC GTAGCGCGCA TCGCTGCCCT CCTGGCGCGG
CCGGAGACGG TGCCGGAGCA CGTTTGTGCT ATCACCTTCA CCAACCGGGC CGCCAGGGAG
GTGCGGGAGC GGCTTGTGGC TACGGCCGGC GGAGCAGGGG AGCGGGTCTT TGTGGGGACG
TTTCACCGGT TCTGCCTTGA CTGGCTCCGG CAGGAGGAGC CGGGGCTCGC CGTGGTGGGG
GAGGAGAGCC GGGAGCGGCT CCTGAAGCGC CTCTTTCCCG ATCTGGGGAA AAAGGAACAG
GGTGCCGTGG CCGACGGCAT CGCAGATCAT CTTCACCGCT CGGGTCTCGA CGGGGCGTCT
GAGTCGCTGC GGCGGTACCT GGAGGAGCTT GCGGGACGCG GGGCCGTGGA CCTGGATGCC
GTGGTCCCCC TCGTTGTGCG GCGCCTCGCG GAGGACGACT GTTTTCGGCA AAGGGTCTGT
GGCAGTGTCG AGCATCTCTT CGTGGACGAG TTCCAGGACC TGAACGCCCC CCAGTACGCC
CTGGTGGAGA TCCTGGCCCG GGAAGCGACG GTCTTTGCCA TCGGCGACCC GGACCAGGCC
ATCTACGGCT TCCGGGGGAG CGATCCCACC TTTTTCTTCC GCTTCGCCGA CCATCCCGGC
ACCCGGCGGC TTTCCCTCTC CCGCAACTAC CGTTCGGTTT CGCCGGTGGT GGAGGGGGCT
TCGGCGGTCA TTGCCCGAAA TACCCTGCGG AGCGGCCTCG CCCTTGTGGC CGGGGCACCG
CACCAGGGGA TGATCGAGCT TCACCGTGCC CCCACGCCGG CAGCGGAGGC GGAGTTCATC
GTGCGGCGCA TCGAGGAGTT CATGGGTGGG GTCAGCAACT TCTCCCGGAT TTCGGGGCGG
GGTGGCGACC AGGGGAGGGG GCGAAGCTTC GGGGAGATGG CGGTTCTCTA CCGGCTTTCC
AGGCAGGCCG AGGAGCTGGC CGGGGCGCTG GAGCGGCGGG GCATCCCCTT TCAGCTCATT
GGCTCGGTCC CCTACTTTCT GGGACCGGCG GTGCGGGCCG TTACCCGGTT CATTCAGGCA
GCCGCCGGAA GCGACGACAT CGGCGAGTGG CTGGCCCTCC TGGGGGGGCT GCGGGGAATC
GGCGAGGAGA GCCTGACCCG GCTGGAGGAG GCGCTTCCCC TGACCGGCGA TTTCCTTCCC
TTGACGGCCG CGGCGGGCCT CCCTTCCGTG GCCGCGCGTC AGGTGGCGGA ACTGGCCGCC
GCCCTGGGGC GGTTCCGGGA CGTGATGTCC CGGGAAGGAA TCGCGCCGGC CATTGGTCCT
GTCTTTCCCT TTCTGGAGGT GGATGCCGGC CATCCCGATG TCTGCCGCCT CGTGGCCCTT
GCGGGGAGTT TCGGGCGCAA TCTCGCGGCC TTTGCCCGCC ATCTGCGGGA CTATGCCTCC
GAGACCCTCT ACGACGAGCG CGCCGAGGGG GTTCCCCTCA TGACGATCCA TGCCGCCAAG
GGGCTGGAGT TCCCGGTGGT CTTCCTGGCC GGGTGCGAGG AGGGGCTTCT CCCCTGCACC
CTCTGGCGCG ATGCCGATCT GGAGGAGGAA CGGAGGCTCT TCTACGTGGG GATGACGCGG
GCCAAGGAGG CGCTTATCCT GACCGCCTCC CGGGAGCATC CCTGGTGCGG CCCGGGGGAG
CGCCCCCTTT CCCGGTTCGT GGAGGAGATT CCGGCGCGGC TTGTCAGCCG CGCCGTTCAG
GATACCGTGC GCACGGGGAA GAAGGGGGAG CAACTGGAGC TGTTCTGA
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| Protein sequence | MEYVADLHVH SPFSRATSRE CDPTGLAAWA RVKGIQVLGT GDFTHPGWFR LLRETLVPAE
PGFFRLREGT VPSPLPGLPP SSTPVRFVLS AEISCIYKRH GVVRKVHNLV YVPDFASAER
LAARLAGIGN IESDGRPILG LDSRDLLEIV LEEAPEGFLV PAHIWTPWFS LFGSRSGFDT
VEECFGDLSP HVFALETGLS SDPDMNRMIS ALDRFTLISN SDCHSPSRLG REANLFATGF
DFFSLRDALK SNHRDTFRGT VEFFPEEGKY HLDGHRACSV CLEPEETRRL DGRCPACGRP
LTVGVLHRVM ELADREHPLF PPDAPEFFSL VPLPEVLGEI LGVGPGSKEV LRQYGRLMAR
FGSEFGLLLH TPPEEIWEVA PLVAEAVTRI RSGRVIRHGG YDGEFGTIRV FEEGEVARLS
GQAGLFADDP PRRSRRKEPP QPLAPSVRKD VTASDSPPGG PNPEQAEAIG CADRQVLVAA
GPGTGKTYTL VARIAALLAR PETVPEHVCA ITFTNRAARE VRERLVATAG GAGERVFVGT
FHRFCLDWLR QEEPGLAVVG EESRERLLKR LFPDLGKKEQ GAVADGIADH LHRSGLDGAS
ESLRRYLEEL AGRGAVDLDA VVPLVVRRLA EDDCFRQRVC GSVEHLFVDE FQDLNAPQYA
LVEILAREAT VFAIGDPDQA IYGFRGSDPT FFFRFADHPG TRRLSLSRNY RSVSPVVEGA
SAVIARNTLR SGLALVAGAP HQGMIELHRA PTPAAEAEFI VRRIEEFMGG VSNFSRISGR
GGDQGRGRSF GEMAVLYRLS RQAEELAGAL ERRGIPFQLI GSVPYFLGPA VRAVTRFIQA
AAGSDDIGEW LALLGGLRGI GEESLTRLEE ALPLTGDFLP LTAAAGLPSV AARQVAELAA
ALGRFRDVMS REGIAPAIGP VFPFLEVDAG HPDVCRLVAL AGSFGRNLAA FARHLRDYAS
ETLYDERAEG VPLMTIHAAK GLEFPVVFLA GCEEGLLPCT LWRDADLEEE RRLFYVGMTR
AKEALILTAS REHPWCGPGE RPLSRFVEEI PARLVSRAVQ DTVRTGKKGE QLELF
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