Gene Gmet_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3220 
Symbol 
ID3740975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3620439 
End bp3621140 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID637780507 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_386158 
Protein GI78224411 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.975965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00188513 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCAC CATCAGTACT GCTCGTCGAC GATGAACGCT TTTTTCTCTC CGTGCAGCGG 
GACTTTCTCA AGGGCTCCCC GATCGCCGTC CTCTCCGCCT CGGGGGGAGA GGAGGCCCTG
AGAATCGCCC GGGAGCAGCG GCCCGACCTG ATCTACCTCG ACTGCCGGAT GCCGGAGATG
GACGGCGTCG CCTGCTGTAC GATCCTCAAG GGAGACCGGG AACTGCGCAC CATTCCCGTT
CTGATGATGG TGCCGGAGGG TAAGGAGAAG GACCGGGAGC GGTGCCTTGC AGCGGGGTGC
GACGGGATCA TCGCGAAGCC CATCGACCGG CGGGAGTTCC TCGAAGCGGG GCGGCGATTC
GTCCCCGAGG TGGAGCGTCG CCACCAGCGG ATCCGGTGCG GGTCCCTGGC CGTCTTCCGC
AGGGGGAACG AAAGCTTCCA CGGCTCCATC GAGGACATCA GCTTCAGCGG TGTCTATGTG
GGTGCGCGGT GCGACGTGAA AATGGAGGAC CGGATCCGGC TCGGTTTCTT TCTCCCGGGG
AGCGATCTCA TCGAGACCGA CGCCCGGGTA GCGTGGGTCA ACCAAGGACA CCGCCGGATC
AAGTCGGGCC TCCCCGAAGG GTTCGGGGTC GAGTTCGTCG GCATCGCAGC CAAGGCCGCC
GACCAGGTGA AACGGTACAT TGCCGCTTAC GTTCCTCGTT AG
 
Protein sequence
MKPPSVLLVD DERFFLSVQR DFLKGSPIAV LSASGGEEAL RIAREQRPDL IYLDCRMPEM 
DGVACCTILK GDRELRTIPV LMMVPEGKEK DRERCLAAGC DGIIAKPIDR REFLEAGRRF
VPEVERRHQR IRCGSLAVFR RGNESFHGSI EDISFSGVYV GARCDVKMED RIRLGFFLPG
SDLIETDARV AWVNQGHRRI KSGLPEGFGV EFVGIAAKAA DQVKRYIAAY VPR