| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3219 |
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| Symbol | |
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| ID | 3740974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3618425 |
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| End bp | 3620422 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780506 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_386157 |
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| Protein GI | 78224410 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0533109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000839421 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCGTT ATACCCTGGT AAGTGACTAT ACTCCCCGCG GAGACCAACC GAGGGCCATC
GAGGAACTCA GCGAGGGAAT CCTCCGGGGC GACCGGCACC AGGTTCTCCT GGGGGTCACC
GGCTCGGGGA AGACCTTCAC CATGGCGAAC GTCATCGCCG CCACCAACCG TCCCGCCCTG
GTCCTGGCCC CCAACAAGAC CCTGGCTGCG CAACTCTACG GCGAATTCAA GGAGCTCTTC
CCCCACAACG CCGTGGAGTA CTTCGTCTCC TACTACGACT ACTATCAGCC CGAAGCCTAC
ATCCCCACCA CGGACACCTT CATCGAGAAG GACTCCTCCA TCAACGACGA GATCGACAAA
CTGCGCCACG CGGCCACCCG CAGCCTCCTG ACCCGGCAGG ACGTGATCAT CGTGGCCTCG
GTGTCGTGCA TCTACGGCAT CGGCTCCCCG GCCGAGTATC AGGCAATGCA CATCTTCTTT
CACGAGGGAG AGGAGTACGG GCGGGACACC CTGCTGCGCA AGCTCGTGGA GATCCAGTAC
GAGCGTAACG ACATTGATTT CCATCGGGGA ACCTTCCGGG TGCGTGGGGA CATCGTGGAG
ATCTTTCCGG CCCACGAGGA CGAGAAGGCG CTGCGGATCG AATTCTTCGG CGACGCGGTG
GAGGCCATCA GCGAGATCGA TCCCCTGCGG GGGGTGGCGC ACCAGCGGCT TGCCAAATGC
GCCGTCTATC CTGCGTCCCA CTACGTGGCC ACCCGGGAAA CCCTTGAGCG GGCAATCGAA
GAAATCAGAG TAGCCCTGCG GGAGCGAATC CAGTGGTTCC GGGAACGTAA CATGCTCGTG
GAGGCCCAGC GGCTCGAGCA GCGCACCATG TTCGACCTGG AAATGATGGA AGAGATGGGG
TTCTGCCAGG GAATCGAAAA CTACTCCCGC CACTTTGACG GCCGGGCGCC GGGGGAGCCC
CCCTACACAC TCCTCGATTA TTTCCCGAAG GACTTCCTCC TCTTCGTGGA CGAGTCTCAC
ATCACCGTCT CCCAGGTGGG AGGGATGTAC CGGGGGGACC GAAGCCGCAA GGAGACCCTG
GTGAATTACG GGTTCCGCCT CCCGTCGGCC CTGGACAACC GCCCCCTCAC CTTCCAGGAG
TTCACTGCCC GGCTCAACCA GACGATCTAC GTCTCCGCCA CCCCCGCCGA CTACGAATTG
CAGCAGGCCG GCGGCGTGGT GGTGGAACAG GTGATCCGCC CCACCGGCCT CCTGGACCCG
GTCATTGAGG TGAGGCCTGC CGCAGGCCAG GTGGACGACC TCCTCCACGA AGTCCGGGAG
ACCGTGGCCC GGGGCGAGCG GGTGCTGGTC ACCACCCTCA CCAAGCGGAT GGCCGAGGAA
CTGACCGACT ACTACCGGGA CCTGGGGGTA CGGGTGCGGT ACCTCCACTC GGATATCGAC
ACCATCCAGC GGATGCAGAT CATCCGGGAC CTGCGCCTCG GCGAGTTCGA CGTGCTCGTG
GGGATCAACC TCCTGCGGGA GGGGCTCGAC ATCCCCGAGG TTTCGCTGGT GGCGATCCTC
GATGCCGACA AGGAGGGATT CCTCCGCTCA GCCCGGTCCC TGATCCAGAC CTGTGGCCGG
GCCGCCCGCA ATGTCAATGG CCGGGTCACC ATGTACGCCG ACGCGGTAAC CGGCTCCATG
GAGGCATGCA TCGAAGAGAC CGCACGGCGC CGGACGATCC AGGAGGCTTT CAACACCGAG
CACAACATCA CCCCCCGGAC GGTGAAAAAG GGGCTCCGCA CCATACTCGA ATCCATCGAG
GAGCGGGACT ACTACACCAT TCCCCTTGCG GCCGAGCCTC AAGAAGAATA CGTTCCTGCC
GATGAGATTC CTAAGCTGGT GAAGCGCCTC CGCAAGGAGA TGCTTGCCTC TGCCAAGAAC
CTGGAATTCG AGAAGGCGGC CGAACTCCGT GACCGGATCA AGAACCTGGA GGAGCGGCAC
CTTCAGCTCC ACCCCTGA
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| Protein sequence | MDRYTLVSDY TPRGDQPRAI EELSEGILRG DRHQVLLGVT GSGKTFTMAN VIAATNRPAL
VLAPNKTLAA QLYGEFKELF PHNAVEYFVS YYDYYQPEAY IPTTDTFIEK DSSINDEIDK
LRHAATRSLL TRQDVIIVAS VSCIYGIGSP AEYQAMHIFF HEGEEYGRDT LLRKLVEIQY
ERNDIDFHRG TFRVRGDIVE IFPAHEDEKA LRIEFFGDAV EAISEIDPLR GVAHQRLAKC
AVYPASHYVA TRETLERAIE EIRVALRERI QWFRERNMLV EAQRLEQRTM FDLEMMEEMG
FCQGIENYSR HFDGRAPGEP PYTLLDYFPK DFLLFVDESH ITVSQVGGMY RGDRSRKETL
VNYGFRLPSA LDNRPLTFQE FTARLNQTIY VSATPADYEL QQAGGVVVEQ VIRPTGLLDP
VIEVRPAAGQ VDDLLHEVRE TVARGERVLV TTLTKRMAEE LTDYYRDLGV RVRYLHSDID
TIQRMQIIRD LRLGEFDVLV GINLLREGLD IPEVSLVAIL DADKEGFLRS ARSLIQTCGR
AARNVNGRVT MYADAVTGSM EACIEETARR RTIQEAFNTE HNITPRTVKK GLRTILESIE
ERDYYTIPLA AEPQEEYVPA DEIPKLVKRL RKEMLASAKN LEFEKAAELR DRIKNLEERH
LQLHP
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