| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3195 |
|---|
| Symbol | rplU |
|---|
| ID | 3741105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3596902 |
|---|
| End bp | 3597210 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637780482 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_386133 |
|---|
| Protein GI | 78224386 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 9.73006e-17 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 7.71694e-24 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCGG TAGTGAGAAC CGGAGGGAAG CAGTACAAAG TTTCCGAAGG CGACTTTCTG
AAAGTCGAGA AGCTTGAGGG AGCGGTGGGC GACACCATCG AACTCAAGGA CATCCTGATG
GTTGGCGGCG AAACGGTCAA GATCGGAACA CCGTTAGTGC CCAGCGCCTC TGTGGTCGGC
AAAATTGTCG AGCAGGGCAA GGACAAGAAG ATCCTCGTCT TCAAGTCCAA GAAGCGCAAG
GACAGCAAGA AGCTGCGCGG GCACCGTCAA CCGAGAACCG TACTCAAGAT CGAAAAGATC
AACGGGTAA
|
|---|
| Protein sequence | MYAVVRTGGK QYKVSEGDFL KVEKLEGAVG DTIELKDILM VGGETVKIGT PLVPSASVVG
KIVEQGKDKK ILVFKSKKRK DSKKLRGHRQ PRTVLKIEKI NG
|
|---|
| |