| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3177 |
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| Symbol | |
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| ID | 3741048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3575507 |
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| End bp | 3577711 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780464 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_386115 |
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| Protein GI | 78224368 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.392002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCC CCCTCTCCGT CATATTCGTA TGGCACATGC ACCAGCCCTA CTACAAGGAT
CCGGTGAAGG GGGAGTACGC CCTTCCCTGG ACCTACCTCC ACGCCGTCAA GGACTACTTC
GACATGGCGG CCATCGTGGA CGACACCCCC AATGCCCGGG CGGTCTTCAA CCTGGTGCCG
TCGCTCCTGG ACCAGATCAT CGACTACGCC GGCGGCACGG CCGTGGACCC TTGGCTTGTC
CGGGGGCGGA TGGCCCCGGC CGACATGGCC GAGGAGGACC GGCTCTTCGC CCTGGAGAAC
TACTTCTCCG CCAACCGCCA GCGGCTCATC GAGCCGAACC GCCGCTATCT GGAGCTCCTC
CATCTTGCAG GCGACGGGAC CCGGGTGAAG AGCCGGGAAC GGCACCGCCA CTTCAGCCAC
CAGGACCTCC TGGACCTCCA GGTCTGGTTC TTCCTGGCCT GGACCGGCGA GGCGGCCCGC
CGCCGCTACC CCGAGCTCAA GGAGCTGGCG CGGAAGGGGC GCAACTTCAC CGAGGATGAC
AAGGCGCTCC TCTTCACCCG CCACGCCGAC ATCCTCAACG GGATCATTCC CCTCTACAAA
AAGCTCCACG ATGAGGGGAA GGTGGAACTG GCCGTCTCCC CTTACTACCA CCCGATTCTT
CCCCTTCTCT GCGACATGAA GGCGGCCGCC ATCGCCATGC CCCGGGCGAA CCTCCCGGCA
ACCCGCTTTC GCCATCCGGA GGACGCCCGG AGCCAGGTGA GTCGCGGCAT CGCCCGGTTC
CAGGAGGTGT TCGGCTTCAC CCCGGTGGGC ATGTGGCCGT CGGAGGGGTC GGTGAGCGAC
GAGGCCCTTG CCATCATTGC CGGCTGCGGC ATCAAGTGGA TCGCCACCGA CGAGGAGATC
CTCGCCCGCA CCCTTCCCGG GGGACTCGGT CCCGACCGGG AGGCCCTCTA CCATCCCTAC
ACCTTCCGCC ACCGCACCCG GGAGCTGAAG GCCTTTTTCC GTGACCATCT CCTCTCGGAC
CTGATCGGCT TCACCTATTC CTCCTGGGAA CCCCGCCGGG CGGTGGAGGA TTTCGTGGGG
AGACTCCGGG CAATACGGGA GAGCACTCCC GACGCCCGGG TAGTGCCGGT GATCCTGGAC
GGCGAGAACG CCTGGGAGTA CTACCCCGAC AACGGCTACG ACTTCCTTCG GGGTCTCTAC
AGCGTCACCG CCGCCGCGCC GGGAATCGAA TGCACCACCT GCTCCGGGTT CCTTGCCCGG
GAGCCGGAGC GGAGGGTCAT CGAACACATC CACCCCGGCT CCTGGATCAA CGCCGACTAC
GGCATCTGGG TCGGCCATCC GGAGGAGAAC CAGGGGTGGG ACTACCTGGA GCGGGCCCGG
GAGGCGGCGG TCACCGCCAG CCCGCTGGTG GCCGACCTCA TGGCCGTGGG TGACCAGTGG
GAGGGGGAGG GGACCGACGA GGAGCGCGTT GCCCGGCTCG TCTGCACCTC CCTCTACGCC
GCCGAGGGGA GCGACTGGTT CTGGTGGTAC GGCGATGATC ACTTCTCCTC CCACAGCGAC
CGCTTTGACC GCCTCTTCCG CAAGCACCTC ATGAACGTCT ACCGCCTCCT CGGCCTCGAC
ATCCCCCGGG AGCTCTACGA GCCCATCAAG AAGCTTACTC CGGCGGGGCT CGTGCGGGAA
CCGGCGGCCC TTATCACCCC CACCATCAAC GGACGGGTGG ACGACTATTT CGAGTGGCTG
GCGGCGGGGC TCGTGGACCT CACCAAGCAG GCATCGGCCA TGCACGCCGC TGAAAGCCTT
CTCCAGTCCA TTTTTTACGG CTATGACCGG GATAACCTCT ATATCCGCCT CGACGGCCCA
ACACCGTTGA ACCTCGCCAT TCAGGAGGGT GATGCCCTTC AGCTCCACCT GGTCACCGGG
AGCGAGTATC GTCTCGAAAT AACTCCGTCC GATCGGTCTG GTGAGCTCAT GGTGAAAGGG
ACCAAGGGGT GGAAGAAGGC CAAGGGGCGC TGCTGCTGGG AGATCGGCCA TGTCTGCGAG
GCGGCTGTTC CCCTGGGGCC CCTGGCGCTC AAGCCGAGGG GGAAGCTCTT CGCTTTCGTG
ACCCTCGTCC GCGGAGGCGA AGAGTTTGGT CGCTGGCCCG CCGATTCGCC CCTCGTTCTG
AGCTATGCGG GGCCGGAGCT GGATGCGGAG AACTGGCTCA TATGA
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| Protein sequence | MSAPLSVIFV WHMHQPYYKD PVKGEYALPW TYLHAVKDYF DMAAIVDDTP NARAVFNLVP
SLLDQIIDYA GGTAVDPWLV RGRMAPADMA EEDRLFALEN YFSANRQRLI EPNRRYLELL
HLAGDGTRVK SRERHRHFSH QDLLDLQVWF FLAWTGEAAR RRYPELKELA RKGRNFTEDD
KALLFTRHAD ILNGIIPLYK KLHDEGKVEL AVSPYYHPIL PLLCDMKAAA IAMPRANLPA
TRFRHPEDAR SQVSRGIARF QEVFGFTPVG MWPSEGSVSD EALAIIAGCG IKWIATDEEI
LARTLPGGLG PDREALYHPY TFRHRTRELK AFFRDHLLSD LIGFTYSSWE PRRAVEDFVG
RLRAIRESTP DARVVPVILD GENAWEYYPD NGYDFLRGLY SVTAAAPGIE CTTCSGFLAR
EPERRVIEHI HPGSWINADY GIWVGHPEEN QGWDYLERAR EAAVTASPLV ADLMAVGDQW
EGEGTDEERV ARLVCTSLYA AEGSDWFWWY GDDHFSSHSD RFDRLFRKHL MNVYRLLGLD
IPRELYEPIK KLTPAGLVRE PAALITPTIN GRVDDYFEWL AAGLVDLTKQ ASAMHAAESL
LQSIFYGYDR DNLYIRLDGP TPLNLAIQEG DALQLHLVTG SEYRLEITPS DRSGELMVKG
TKGWKKAKGR CCWEIGHVCE AAVPLGPLAL KPRGKLFAFV TLVRGGEEFG RWPADSPLVL
SYAGPELDAE NWLI
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