| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3167 |
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| Symbol | |
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| ID | 3741038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3563997 |
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| End bp | 3566627 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637780454 |
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| Product | helicase c2 |
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| Protein accession | YP_386105 |
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| Protein GI | 78224358 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000644587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCCA CAAGAAGTAA TCTCTTCGGC CGAATCAGCC GGAACAGGGG GCGGAGCGAT
CCGCCCCTTT TTTCATTGCC CCCTCCCCCC AAACCCGATA TTCTCGACCG GATGAAGCGG
TACTTTTCAG AGCAGGCCAT CCTCGACATG CGGGCCGCCA TCGCGGCGGC GGGGGGAAAC
GAAGTCTTCT TCCTGGGGCG CACCGACGAA AACCGGATCG TGACCGAGGC GGAGCCCCTG
GCCCGGGGGA ACCGGGACGC GGTTGCCGCC ATCATGATCG CCACCAGCTT CGGCGACGTG
GTGATCCACA ACCACCCCTC AGGGAACCTT GACCCCTCCC AGGCCGACAT CGAGATCGCA
TCCCTCCTGG GGAACCAGGG AGTCGGCTTT TCCATCGTGG ACAACGCCGT GGAGCGGTGC
TATCAGGCGG TGGCCCCCTT TGCCCGGCGG GAGACAGAGC GGCTGTCATT CCCCGAGATC
GAGCGGATTT TCGCGCCGGC CGGGGTCCTG GCAGCCAATC TCCCCGGTTA CGAGCACCGG
GAAGAGCAGC TCCGGATGGC CTTTGCCGTC ACCGAGGCGT TCAATGACGA CCGGGTGGCG
GTCATCGAGG CCGGCACCGG CACCGGCAAA TCCCTCGCCT ATCTCGTCCC GGCGGTGCTC
TGGGCCATCC GCAACAAGGA GCGGATCGTC GTCTCCACCA ACACCATCAA CCTCCAGGAA
CAGCTCATAA AAAAAGACAT TCCCTTCCTC CAGCGCCACG CCGGGGTCCA GTTCCGGGCA
GTCCTCGTGA AGGGTCGCTC CAACTACCTC TGCCTCCGGA AACTGGCCGG AGTCAAAAGC
GAACCATCCC TCTTCGCCGA TGACCCGGCG GCCGGGGAAC TGGAGGCGAT CATCGCCTGG
AGCGAAAAGA CGGCCGAGGG ATGCCGCAGC GATCTCTCCT TCATCCCCAA GCCGGAGACC
TGGGAGGAGG TAGCCTGCGA GGCGGACCAG TGCGGCCGGA TCAAGTGCCC CCTTTACGCC
CGCTGCTTCT TCTACGGCGC CCGGCGCCAG GCGGCAAGCG CCGATGTCCT CGTGGTGAAC
CACGCGCTCC TCATGGCCGA CGTGGCCCTG CGCCAGGAGA CCGGCTACCG CTCCACCGCC
ATCCTCCCCC CCTTCGAACG GCTCATGGTG GACGAAGGGC ACCACCTGGA GGACGTGGCC
ACCGGGCACC TCTCCTCTCA GGTCTCCCGC CAAGGGATCC TGAAGCTCCT GGGGCGCCTC
CAGAATCCGC GCAAAGCCCA GCGGGGGCTC CTGCCCCAGC TCTCGGCCCA GCTCTCCCGG
GAGGTGCCGG TGGAGCTGGA CGACCTCTAC CGGGACCTGG CCGAGCGGCT GGAGGAAAAG
CTCATCTCCC GCACCCAGGA GCTGGCAGCC GGGGCGGTGC GGGCCATGGA CGCCATCGGC
CTCGCCCTCC TCTCCCACCT GAAGGGGAAG GGACCGGAGA ACGGGGAAAA GAAGCTCCGG
GTCACCCCGT CCCTCTTCGG CTCAAAGCTC TGGCAGGAGA CCGACGACGA GGCCCGGGAG
CTGGCCGCGG ACCTGAACAC GTTCGTGCGG GAGCTGAAGG AATTCCTCAC CGGGTGCGGA
CGGCTCCCGG AAGCGGTCCA GGAGAAGCTC TCGGGGCTCC TCGTGGACCT TCGGGGGGTG
ACGGGGCGCC TCGAAGCCTT GGCCGCGGAC CTCCTCTTCT TCATCGGCCG GGACGGCGAA
GTCTGCCGCT GGTTCGAGGT GAAAAAAGGG GCCAAGGGGA TAGCGGTGAG GCTCTGCGCC
TCCCCCCTGG AGGTGGCCGC CTCCCTCAAG CGAACTGTCT TCGACGCCTT CCGGACCGTG
GTGGTCACCT CGGCCACCCT GGCGGTGGGG GAAACATTCG ACTACCTGGA AGGTCGGACC
GGAATCGCCC TTCTGGACCG GGGACGAGTG ACGGAGCTCC TCCTCGCATC CCCCTTCGAC
TACGAGCGCC AGGCCTTCGT CGGTATCCCC GCCGACCTTC CCGAGCCCAC GTCAAGGGGG
TTCCAGGAGG CCCTGGAGGT GGCCCTCCAC CGGGGGCTCG CCATCTCCAA CGGCCACGCC
TTCGTCCTTT TCACCTCCTA CGACCTCCTC TCCCGCATCC ACGGCAGGAT GGCAGAGGCG
CTGCGGCGCC GGGGGCTCAC TCCCATGCGC CAGGGGGAGA TCAACCGGCA CCACCTCCTG
GCCCGGTTCC GGAAGGAGCC CAACGCGGTC CTTTTCGGCA CCGACTCCTT CTGGGAAGGG
GTCGACGTGC AGGGGAAGGC ACTGGAGCTG GTGGTCATCA CGCGACTCCC CTTCCGGGTA
CCGACGGAGC CGATTCTGGA GGCACGGGCC GACCACATCG CCCTCCGGGG AGGGGACCCC
TTCATGGAGT ACACGGTCCC CCAGGCGGTC ATCAAGTTCA AGCAGGGATT TGGGAGGCTG
ATCCGGAGCA GGGAGGACCG GGGAGCGGTC CTGATCCTCG ACAGCCGGGT GCTTTCGAAA
AACTACGGGC GGTTTTTCCT CCGGTCGCTG CCGCCGGTAC GGCTTGCGGA CGGCGGCAGC
GGGGAGGTCT TCGGGGAGAT GGAGCGGTTT TTCAGCTCTT CGCCTTCATG A
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| Protein sequence | MSATRSNLFG RISRNRGRSD PPLFSLPPPP KPDILDRMKR YFSEQAILDM RAAIAAAGGN
EVFFLGRTDE NRIVTEAEPL ARGNRDAVAA IMIATSFGDV VIHNHPSGNL DPSQADIEIA
SLLGNQGVGF SIVDNAVERC YQAVAPFARR ETERLSFPEI ERIFAPAGVL AANLPGYEHR
EEQLRMAFAV TEAFNDDRVA VIEAGTGTGK SLAYLVPAVL WAIRNKERIV VSTNTINLQE
QLIKKDIPFL QRHAGVQFRA VLVKGRSNYL CLRKLAGVKS EPSLFADDPA AGELEAIIAW
SEKTAEGCRS DLSFIPKPET WEEVACEADQ CGRIKCPLYA RCFFYGARRQ AASADVLVVN
HALLMADVAL RQETGYRSTA ILPPFERLMV DEGHHLEDVA TGHLSSQVSR QGILKLLGRL
QNPRKAQRGL LPQLSAQLSR EVPVELDDLY RDLAERLEEK LISRTQELAA GAVRAMDAIG
LALLSHLKGK GPENGEKKLR VTPSLFGSKL WQETDDEARE LAADLNTFVR ELKEFLTGCG
RLPEAVQEKL SGLLVDLRGV TGRLEALAAD LLFFIGRDGE VCRWFEVKKG AKGIAVRLCA
SPLEVAASLK RTVFDAFRTV VVTSATLAVG ETFDYLEGRT GIALLDRGRV TELLLASPFD
YERQAFVGIP ADLPEPTSRG FQEALEVALH RGLAISNGHA FVLFTSYDLL SRIHGRMAEA
LRRRGLTPMR QGEINRHHLL ARFRKEPNAV LFGTDSFWEG VDVQGKALEL VVITRLPFRV
PTEPILEARA DHIALRGGDP FMEYTVPQAV IKFKQGFGRL IRSREDRGAV LILDSRVLSK
NYGRFFLRSL PPVRLADGGS GEVFGEMERF FSSSPS
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