Gene Gmet_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3156 
Symbol 
ID3741125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3551732 
End bp3552064 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID637780443 
Producthydrogenase expression/synthesis, HypA 
Protein accessionYP_386094 
Protein GI78224347 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGA TGTCCATAAC CCAGAGCGTG GTGGAGATCT GCGAGAAGAG TGCCGGGGGG 
CGGCGGGTCC TGGCGGTGAC CCTGGAGATC GGCGACCTCT CCGGCGTGGT CCCCGATGCG
ATCGAGTTCT GCTTCGAGGC CTGCACGCGG GATACGCTCC TGGAGGGTGC CCGGCTCGTC
ATCGAGCGGG TGCCGGGTCG TGGGGAATGC ACCTCCTGCG GAAAGGAATT TCCGGTTCGT
GGCTACTTCG ACCCCTGTCC AGCCTGTGGC GCCTACGGCA TGAGAGTTGT GTCGGGGGAG
GAGCTGCGGG TGAAGGAGTT GGAGGTGGAG TAA
 
Protein sequence
MHEMSITQSV VEICEKSAGG RRVLAVTLEI GDLSGVVPDA IEFCFEACTR DTLLEGARLV 
IERVPGRGEC TSCGKEFPVR GYFDPCPACG AYGMRVVSGE ELRVKELEVE