| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3112 |
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| Symbol | |
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| ID | 3740925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3510531 |
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| End bp | 3512114 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637780400 |
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| Product | flagellar FliF M-ring protein |
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| Protein accession | YP_386051 |
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| Protein GI | 78224304 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG GTCTGAAAAA ATTGTTGGAG CCGTTCATGG CCCTTCCCCC CGCGAAGCGG
TGGATCGTGG GCGGGGTCGT GGGGGTGTCG ATCATCGCCT TCGCCCTCCT GATAATGGTC
GCCAACCGGA CCGACTACCG GCCCCTCTTC ACCAACCTCA CCACCGAGGA TGCCGGCGAG
ATCGTCACCA AGCTCAAGGA GCAGAAGGTT CCCTACCGGA TCGCCGCCGA CGGCAAGGCA
ATCCTGGTCC CCTCCGACAA GGTCTACGAT CTGCGCCTGA CCATGGCCTC CGCAGGGCTT
CCCCAGGGGG GCGGGGTCGG CTTCGAGATC TTTGACCGAA AAAACTTTGG CATGACCGAG
TTCGTCCAGA AGCTCAACTA CCAGCGGGCC CTCCAGGGGG AACTCTCCCG GACCATCGGC
CAGATCGCCG GGGTGGAGCA GGCTCGGGTC CACCTGGCAA TTCCTGAAAA GGCCCTCTTC
AAGGAGGACG AGAAGCCCGC CACCGCATCG GTGGTGCTCA AGGTGAAGGG GAATCGCCAA
CTCAATGACA GTGATGTTCA GGGGGTCGTC CATCTCGTGG CTTCCTCCAT CGAGGGGATG
AACCCGGAGC ACGTGACCGT CCTCGACCAG AAGGGGAAGC TCCTTTCCAA GAATGGACCC
ACTGACGCCG CCGGCAAGAT GACCGCCTCC ATGCAGGAGG TGCAGCGGAC CTACGAGCGG
GGCACCGAGG AGCGGCTCCA GTCGCTCCTG GACAAGGCGG TCGGTTCTGG CAAGTCGGTG
GCCCGCGTGT CGGCGGTCTT CGATTTCCGG CAGGTGGAGC GCTACGAGGA GAAGTACGAC
CCCGAAACCG TGGTCCGCAG CGAGCAGCGC AGCGAGGAGA GCATGGGAGG CGCCAACGCC
ACGGCGGGAG TCCCGGGGGC ACAGACGAAC CTGGGCCGCA CCCCGGCCGG CGCCGGCGGC
GCCACCGGCC CTAACGGAAG CAAGAACGAT GAAACCCTCA ACTACGAGGT GAGCCGCTCC
ACGGCCCGGA CCATCGAGCC GGTGGGAGCC CTTTCCAAGG TGTCGGTGGC GATCCTCGTG
GACGGCAAGT ACGACGCCCC GGCCGTCGGC AAGGACGGCA AGAACGCCAA GCCCAAGTAC
ACCCCCCGCT CCCCCGCCGA ACTCCAACAG ATTGAGGCTC TGGTCAAAGG CGCCGTCGGC
TTCAACGCCG TCAGGGGTGA TCAGGTGACG GTGGCGAACA TCCCGTTCCA GGATACCGCC
GAGGCGGGCA CCGACGAGGG GAGCCAGTGG TGGAACGCGC CGATCTTCCT CTCGCTCCTC
AAGAACGGCC TCATCGGCTT CGGCTTCCTG GCACTCCTCC TCTTTGTGGT ACGCCCCCTC
ATGAAGATGC TGAAGCCCGA GAAGAAGACC TCCTTCGAGC CGATTTCCAC TGCCGAGGAA
ACCATCAACC AGATCGCCGA GGTCCACCGC GCCCAGATCC AGAACCAGAC CATCCGGCAG
GTGGAACTCA TGAACAAAGT GAAGGAAGAG CCCTACCAGG CCGCCCAGAT CCTCCAGAAC
TGGCTCCGCG CCAAGGAACA GTGA
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| Protein sequence | MPEGLKKLLE PFMALPPAKR WIVGGVVGVS IIAFALLIMV ANRTDYRPLF TNLTTEDAGE
IVTKLKEQKV PYRIAADGKA ILVPSDKVYD LRLTMASAGL PQGGGVGFEI FDRKNFGMTE
FVQKLNYQRA LQGELSRTIG QIAGVEQARV HLAIPEKALF KEDEKPATAS VVLKVKGNRQ
LNDSDVQGVV HLVASSIEGM NPEHVTVLDQ KGKLLSKNGP TDAAGKMTAS MQEVQRTYER
GTEERLQSLL DKAVGSGKSV ARVSAVFDFR QVERYEEKYD PETVVRSEQR SEESMGGANA
TAGVPGAQTN LGRTPAGAGG ATGPNGSKND ETLNYEVSRS TARTIEPVGA LSKVSVAILV
DGKYDAPAVG KDGKNAKPKY TPRSPAELQQ IEALVKGAVG FNAVRGDQVT VANIPFQDTA
EAGTDEGSQW WNAPIFLSLL KNGLIGFGFL ALLLFVVRPL MKMLKPEKKT SFEPISTAEE
TINQIAEVHR AQIQNQTIRQ VELMNKVKEE PYQAAQILQN WLRAKEQ
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