| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3083 |
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| Symbol | |
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| ID | 3740781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3479819 |
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| End bp | 3480910 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637780371 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_386022 |
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| Protein GI | 78224275 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily)
[COG1633] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGA TTCGCGCCCT GGTTTTCGAC CTGGACGGCA CCCTCTACGA CAGTGAAGGG
GTCGGTCGCC AGATCGACGC CTCCGCCATG GGGCATGTGG CCGCGGTACG GGGGATTTCC
CCCGAGGAGG CGAGACTCCT CATCCGGGAG ACCCGGGAAA AGATAGCCGT CCGCACCGGC
CGGACCGCCT CCCTGAGCCA TGTCTGTCTG GAACTGGGGA TTGACCTGCG GGAGCTCCAT
CGCCGTTTTG AGGCCGAGAT CGAACCGGAG CCCTTCCTCA CCCGGGACGA ACGGGTGGTG
GAGTTGCTGG AGAGGCTGGG CGAGCGGTTC GATCTCCATA TCTACACCAA CAACAACCGC
CTCCTCTCTT CGCGGATCAT GACGGCCCTC GGCGTTGACG GGTGCTTCCG GCGCATCTTT
ACCATCGAGG ATTCCTGGCG CCCCAAACCG GACCGTCAGG TTCTCGAAGA GATTTTCCGG
GAGATCGGGC AAGAACCCTC CCACTGCCTC TTCGTGGGGG ACCGTTACGA CATCGACCTG
CGGCTGCCGC GGGAGCTCGG CTGCCGGGTA TTTCACTCCA GGACCGTTGA CGAACTTTTG
ACCATTGAAA CCACTTTACC GTCAGGAGCG CCCATGAACG ACCAGACCAA AGAGACCCTC
GACGCCATCA TGCGGGCCAT TGAGATCGAA AAGGAGACCT TTGACTTTTA CACCAGGGCC
GAGCGGAAAA CCTTCAATCC CGAGGGGAAG CGGATCTTCC GCTGGCTTGC CAAGACCGAG
GAGCAGCACT ACCTGAAGCT GAACGAGCTC TACCAGTCAC TCCACGAGGG GGGGCGCTGG
GTCTTCTACG GCGGCTCCAC CATTACCCTC GACCCGGCGG GCTCCGGGGA GAAGCAGGTG
GGGTTCGACA CCGACGACCT TCAGGCCCTG GAGATCGCTA TGGAGATCGA GAAGAAGGGA
ATCGCCTACT TCGACGACCT CATGGCGAAG ACCGCCGACG CCGACGGCAA GGGGATGCTC
AAGGCCCTGC GGGACGAGGA GACCGAGCAC TTGCGGGTGA TTACCGAGAA GTACAACGCC
ATCAAGGGGT AA
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| Protein sequence | MSGIRALVFD LDGTLYDSEG VGRQIDASAM GHVAAVRGIS PEEARLLIRE TREKIAVRTG
RTASLSHVCL ELGIDLRELH RRFEAEIEPE PFLTRDERVV ELLERLGERF DLHIYTNNNR
LLSSRIMTAL GVDGCFRRIF TIEDSWRPKP DRQVLEEIFR EIGQEPSHCL FVGDRYDIDL
RLPRELGCRV FHSRTVDELL TIETTLPSGA PMNDQTKETL DAIMRAIEIE KETFDFYTRA
ERKTFNPEGK RIFRWLAKTE EQHYLKLNEL YQSLHEGGRW VFYGGSTITL DPAGSGEKQV
GFDTDDLQAL EIAMEIEKKG IAYFDDLMAK TADADGKGML KALRDEETEH LRVITEKYNA
IKG
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