Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3082 |
Symbol | aspA |
ID | 3740780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3478370 |
End bp | 3479779 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637780370 |
Product | aspartate ammonia-lyase |
Protein accession | YP_386021 |
Protein GI | 78224274 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTTC GGATTGAGAA GGATACCCTC GGCGACGTGC AGGTCCCGGC CGGCGCCTAC TACGGTGCCC AGACGGCCAG GGCCGTGGCC AACTTTCCCC TCTCGGGGCT CCGGCCCCAT CCGGCCCTGG TTCGGGCCAC GGTCGTCATA AAAAAGAGCG CCGCCCGGGC CAATATGACC ACGGGGAGGC TCGACCCCCG GCTCGGCGAG GCCATCGTCC GGGCCGCCGA CGAGGCCCTC GCCGGCGACT TCGATCCCCA CTTCGTGGTG GACCCGTTCC AGGCCGGGGC CGGCACCTCC CACAATATGA ACGTGAACGA GATCCTCGCC AACCGGGCCA ACGAACTCCT GGGGGGAGAG CGCGGCGCCT ACGCGCCGGT CCACCCCAAC GACCACGTGA ACATGGCCCA GTCCACCAAC GACGTCTTTC CCACGGCCAT GCGGCTGGCG TCTCTTTCAC TCGTGGAGAA GCTGCGTCCG GGACTGGAGG GGCTCGTGGC GGCCCTGCGG GGGAAGGGGC GGGAGTTCGA CGCCGTCCTC AAGAGCGGCC GGACCCACCT CCAGGACGCG GTGCCGATTC GCCTCGGCCA GGAGTTCGAG GCGTGGGCCG TGGCAATGGA GAAAAACCTG GCGGGGATCG ACGCCGCGCT GCCGGGGCTC CGGGAACTGG GGATCGGCGG CACCGCCGTC GGCACCGGCA TGAACGCCGA GGCGGCCTAC ATCGATCTGG TGGTGGCGGA ACTGGCCCGG GAAACCGGGT TTCCTCTTCA TCGCGGGACG AACCTGGTGG AGCGGATGCA GAACATGGAC CCCTTCGTGG CTCTTTCGTC GGCCCTCAAG GGGCTTGCCG CGAACCTCGT CCGCATCGCC AACGACCTGC GGCTCCTCTC CTCCGGCCCC CGGACGGGGC TCGCCGAGAT CGCGCTTCCG GCGATCCAGC CCGGCTCCTC CATCATGCCG GGGAAGGTGA ACCCGAGCAT GGCCGAGGCA ACCGACATGG TTGCCTTCCA GGTGATGGGG GCCGATGCGG TCATAACCCT GGCAGCCCAG GCGGGACAGC TGGAGCTGAA CGTGATGATG CCGGTCATCG CCTTCAATCT TCTCTTCAGC CTGGAGATCC TGAAGAACAC GGTGCCAAGG CTGGTCCAGG CGTGCATCGC CGGCATCACC GCCGACCGGG AGCGCTGCCG CCGGTACCTG GACCAGTCGG TGGGGCTCGC CACGGTGCTG GCCCCCTACG TCGGCTACGC CGCCGCCGCC GAGGTGGCAA AGGAGTCGAC GGCCACGGGA CGGAGCATCC GGGAGATCGT GGAGGAGCGG CAGCTGCTGA CGGCCGACAA GCTCGCGGAG ATTCTCGACC CCCTTCCCCT TACGAGCCCC GGGGTTCCGG GAGAGAAGCA TAACGATTAA
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Protein sequence | MTFRIEKDTL GDVQVPAGAY YGAQTARAVA NFPLSGLRPH PALVRATVVI KKSAARANMT TGRLDPRLGE AIVRAADEAL AGDFDPHFVV DPFQAGAGTS HNMNVNEILA NRANELLGGE RGAYAPVHPN DHVNMAQSTN DVFPTAMRLA SLSLVEKLRP GLEGLVAALR GKGREFDAVL KSGRTHLQDA VPIRLGQEFE AWAVAMEKNL AGIDAALPGL RELGIGGTAV GTGMNAEAAY IDLVVAELAR ETGFPLHRGT NLVERMQNMD PFVALSSALK GLAANLVRIA NDLRLLSSGP RTGLAEIALP AIQPGSSIMP GKVNPSMAEA TDMVAFQVMG ADAVITLAAQ AGQLELNVMM PVIAFNLLFS LEILKNTVPR LVQACIAGIT ADRERCRRYL DQSVGLATVL APYVGYAAAA EVAKESTATG RSIREIVEER QLLTADKLAE ILDPLPLTSP GVPGEKHND
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