| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3060 |
|---|
| Symbol | |
|---|
| ID | 3741067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3456479 |
|---|
| End bp | 3457696 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637780349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_386000 |
|---|
| Protein GI | 78224253 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.956614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAGC CAGCATTAGG TTGGACGGTG CTATCTCGAG ATGCTTTGAG GCGGGCCGAG
GCGAAACTGC GTAACGATGA GCAGGGGGTA CGAGACGAAG TCGGGTTCCT CGCACTTCAC
CAGGGATATG CGAACCGTTT TTTCCCTGGG ACTTCAGTTC TCCAAACACG TCTAAGATAC
ATCCTCTTTG TTCCATGGCT TTACGAAGAA GCACGGAATA GAAACCTGAG CGAAACACCG
GAACGTGCCA TTTCCCGTAT GGAGATCAGC CTCGCAGGAC GTTTAAAGAG AACCGGTCAA
GATGGGGTTA TCGGGGGGAG GTCTTACCCC GGTCCGACTT CTCAGCCTGC TTCTATGGTT
TACTGGACAG CGCTGGGGAC ATGGGGGATT CTTCGCCCGA CAATGTCGGG CACTATTCCT
GGAAGGGCGG TTGTTAATCG AATGTTGGTG AAGCGCACTA TGGTTCCTCA ACTTGTAGAT
GACGATGGCG AACCTACCGA AGAAGGATTG GAGTTATTTT CAAGCATTCC AAGACCACCA
AAAGAGTGGA CGGATAAGAG CGCTTCTCTC ACGTTTGATA TACAGCCTGA CGAGGCTGCG
TTTCTACGGC GACATTTGAG TGCTGTTACC AGGCCCGGAA CCCCAGACAA AACGTCATTG
CTATCATCAC TGGTTGAGCG AGCCCTGCCG GTGGAAGAAA TTCAATCCCC TTGGGATCGT
ACGGTCATGG CTATTGCTGA TACTGATGAT CGTGCAGCGC TAAGACGAGC TGGACGAGCT
TCCGCACTCG CTGCCATTGG CCGTGCGATC TATTCGGCAC TTGTAGAAGA ATTACGAGAA
CGTGATGGAA ATGAAACGCC AAGTCACCAC CGGAAACAAA TTCTCAAGAC TATCCCTCAG
TACATAACTC CTGCGAAAAA TCTTGATATT AGCTCCGTTG AGCAAGATAT CCCGGGTATT
CCACCACAAT TCACCACACT TCTTCGCGAG ACCCAATTGT GGCTGAATAA GGGAGGGCAC
AATTATTTGG ATCTTCTGGA GGTTTATCAA AAGGCTGAAA TACGTCGTAA GGGCACTAGG
TCAAGATTAC CTTCAACGCC TGCGGCCAAG AAACGTAGAG CGGAGTGGGG AATTGAAGAC
AATACTCTCG CCGAACCGCT TTCATACCGT TGGTACAACG TCCGAAGGAT TCTGTCGGAT
TTAAGAAGTG CATCATGA
|
|---|
| Protein sequence | MLEPALGWTV LSRDALRRAE AKLRNDEQGV RDEVGFLALH QGYANRFFPG TSVLQTRLRY
ILFVPWLYEE ARNRNLSETP ERAISRMEIS LAGRLKRTGQ DGVIGGRSYP GPTSQPASMV
YWTALGTWGI LRPTMSGTIP GRAVVNRMLV KRTMVPQLVD DDGEPTEEGL ELFSSIPRPP
KEWTDKSASL TFDIQPDEAA FLRRHLSAVT RPGTPDKTSL LSSLVERALP VEEIQSPWDR
TVMAIADTDD RAALRRAGRA SALAAIGRAI YSALVEELRE RDGNETPSHH RKQILKTIPQ
YITPAKNLDI SSVEQDIPGI PPQFTTLLRE TQLWLNKGGH NYLDLLEVYQ KAEIRRKGTR
SRLPSTPAAK KRRAEWGIED NTLAEPLSYR WYNVRRILSD LRSAS
|
|---|
| |