| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3052 |
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| Symbol | |
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| ID | 3741059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3446349 |
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| End bp | 3448667 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637780341 |
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| Product | peptidase S1C, HrtA/DegP2/Q/S |
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| Protein accession | YP_385992 |
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| Protein GI | 78224245 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00233494 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.413301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTAA TTACAAATCT TCTAATTATT GCAATTCTTT TTTCAGTTCC TCATGTTTCC
ATCGCCAGAA TACCCGAGGT TGTTCTTTCC AAGAAGTCCG CAGTCGTTTC CATTTACGTT
GAAGATAAAC AAAAGATAGT CGCTGGTGGC AGTGGGTTCA TCATTGACCA GAACGGTATC
ATTGTTACAA ATGCCCACGT CATAGAGCCA TGGAATAAGA GTACTACTGG CATTCTGTAT
GTTAAAAAAT CCGATGGCAC TTTCCTTGAG CCGACTGAGG TCATCGCTGC AGATGCGGTT
AAGGATGTTG CCCTGGTTCG AGTTAAGGAA CAGAACCTGC CTTTTATTAA GCTGACATCG
AACATTACGC CCACTCAAGG TGATGATGTC GTAGTTATCG GGAACCCCCT TGGTCTGGAG
ACAACGGTTA CTGATGGTAT TATCAGCGCC ATCAGAGGGG AAGATGGTTT CCTGCAAATT
TCAGCGCCCA TCTCACAGGG GAGTAGTGGC AGTCCAGTGC TGAACAGCAA GGGGGAGGCG
ATAGGGGTTG CCACCTCGAT TATGGCAGGT GGCCAGAACC TAAATTTTGC CATACCAGCG
AGCTACGTCA CTAATCTTCC CACTCAGGAG AAAGCGCCCC CTGTGAAGGG GCTTAAAAAG
AGAGCAGAGT CACCTTCCGG CTTTGAGACA GTAACCCCGG AGGATATCGA GCGGGACGTT
GTTCAGATAC CGGAAGGGGC TGTTCACAAG GGCAAGGTCT TATTTGCGAC AGACAGTGGT
GGCTACACGT ACATAAGAAT TGAGGAGAAT GGTGCACCAT TATGGGTTGC CGTCACGCAA
ACCACTATTT CCATCGGTGA CATAATCGAA TTTCCTGACA GCCCTCCGAT GACTGGATTC
AATTCAAAAT CTATGAACAT GACTTTCGAC AAGATAACAT TTGCAGCCGG TATACGGATT
GTCCAACGGG GAAATGTTGA ATTTAAATCT CCCGAAGAGA AGCATCTTTA TTATGCTGAG
CAGTATTCTT CTATGAATAA CACTCCAGCA GCGATTGAGG AAATTTCCAA AGCAATCGAG
TTGAACCCGA AGAAGGCTGA ATATTACGGG AAAAGAGCTA ATTACTATCT GCAGCGAAGA
ATGTATGCAG ATAGCAAATC AGATGAATAT CAGCAAATCG TGGCATCGAA CAGAGAATCG
TGCCGTAACG CGGTTGATGA TCTGAACAAG GCTATCGCCA TAAACCCAGG CAATGATGTG
TTTTATGCAA CACAGGCCCG TATTTTCACA GATTCACTAT TTTGCGACTA TGCCAATGCT
GACAAGGCAA TAAAACTCTA TGAAACAGCA ATACAGCTGA ATCCGAAGAA AGCGGATTAT
TATGTTGAAA AGGGGTGGCA GCATAAGATA AAAAATGATT TTAGCAAGGT TCTGGATTGT
GCTAAAAAAG CGCTTTCAAT CAGCCCTAAT AATGAAGATG CACACTATTT GTATGGTTCG
TATTATGAAG AAAACAACAA GTACGATAAA GCCCTTGAGT ATTATACGAA AGGTTTGTCT
GTAAGCGACA ACGTCACTTT TGGTTATTTT TATATAGACG GTGTAATGGA AAAGACCAAG
AAATATGATG ATGCCGTCAG GATATATACT GACCTCATCA AACAACATCC TAAACGTTTG
ATATTTTATA ACGGCAGGGC GGAGTATTAC GCCAAATTGA AAAATTACAA GAAGGCTATT
GCAGACTATA CGACTTGCAT CAAGCTAAAT CCAAATTCCG AATATAATTA CAACCTGAGA
GCAAACTGTT ATTACGAAGA CGGAAAGAAA TCCGAAGCAT TGACCGACTA TCGAACTGCT
TGCGATATGA AGCACGCTGA ATCATGCGAG ATGATTCCAA TTGTATTTGC CGATATCAAG
CGTGGCGCTA ATTGGGTACC AGTGGCAGCA AGCAGCGATG TAAATTATTA TTACGACAAG
AAGGGATATA CAAAAAATAA GAACGGAGTT GCTGTTGCCT GGATTCGCGG GGAAATAACT
GACAAGGAAG AATATATCAA GGATATCGAT ATCAGCGAAT ACGAAAAGGA AAAATACAAA
AATGTGTCAC ATGTTATGAG CAGGTTTGAA GTCGATTGCC CAAATCAAAA ATTGAGAGTG
CCGATTTCAC TGATTTATGC TGAAAACGGC AACGTTATCA GGTCGTATGA AGATGAAAAA
ACAAAATACA GCAATATTAT TCCCAATTCA ATCGGTGCGA GCATTCACGA GAATCTGTGT
AAAGGCGCCC CAGCAAAAAA GATAGGGAAA AAGAAATAA
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| Protein sequence | MRLITNLLII AILFSVPHVS IARIPEVVLS KKSAVVSIYV EDKQKIVAGG SGFIIDQNGI
IVTNAHVIEP WNKSTTGILY VKKSDGTFLE PTEVIAADAV KDVALVRVKE QNLPFIKLTS
NITPTQGDDV VVIGNPLGLE TTVTDGIISA IRGEDGFLQI SAPISQGSSG SPVLNSKGEA
IGVATSIMAG GQNLNFAIPA SYVTNLPTQE KAPPVKGLKK RAESPSGFET VTPEDIERDV
VQIPEGAVHK GKVLFATDSG GYTYIRIEEN GAPLWVAVTQ TTISIGDIIE FPDSPPMTGF
NSKSMNMTFD KITFAAGIRI VQRGNVEFKS PEEKHLYYAE QYSSMNNTPA AIEEISKAIE
LNPKKAEYYG KRANYYLQRR MYADSKSDEY QQIVASNRES CRNAVDDLNK AIAINPGNDV
FYATQARIFT DSLFCDYANA DKAIKLYETA IQLNPKKADY YVEKGWQHKI KNDFSKVLDC
AKKALSISPN NEDAHYLYGS YYEENNKYDK ALEYYTKGLS VSDNVTFGYF YIDGVMEKTK
KYDDAVRIYT DLIKQHPKRL IFYNGRAEYY AKLKNYKKAI ADYTTCIKLN PNSEYNYNLR
ANCYYEDGKK SEALTDYRTA CDMKHAESCE MIPIVFADIK RGANWVPVAA SSDVNYYYDK
KGYTKNKNGV AVAWIRGEIT DKEEYIKDID ISEYEKEKYK NVSHVMSRFE VDCPNQKLRV
PISLIYAENG NVIRSYEDEK TKYSNIIPNS IGASIHENLC KGAPAKKIGK KK
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