Gene Gmet_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3021 
Symbol 
ID3740758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3403021 
End bp3404097 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content61% 
IMG OID637780310 
Productaminodeoxychorismate lyase 
Protein accessionYP_385961 
Protein GI78224214 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.157507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGT CCATACCACC AAAAGATACC CCCGGCGAAA CCGGTGATCA GCCGCCCCGG 
CGTTTCGTAC TGAAAGATCG CCGTATTCTG GCGGCGTCGG CCCTTGCCCT CCTTCTGCTC
CTGGTCCTCC CTGCCCGCTA TCTATTCTTT CTCGCCCTAC CTGCCGGCGA CGGCAAGACA
GTGCGGATCG TCGACTTTGC GAAGGGGGAA TCGGTCGCCA GGATCGCCGC CGACCTCGAA
CGGGACGGGA TTGTCTCCAG TGCCCGCATC TTTGTCATCC ATACCCGTCT CAAGGGAGTA
TCAGGAAAAC TCCAGGCAGG GGAATACCAG TTCAGCAACG GAATGCGGCC CGGGGAAATC
CTCCGCATGA TGCTCAACGG TGAGGTCGCG GTGCGCCGGT TCGCCGTCCC CGAAGGATAC
TCCATCCACC AACTGGCAGA ACTCCTTGAG AGTCAGAAAC TCTTTAGCAA AGAAGGGTTC
CTCAAGGCTG CCACCGACCC TGCGCTCCTG ACCGAACTGG GGATTGAGGG GAAAAGCGTC
GAAGGGTATC TCTTCCCGAG CACCTACGAT GTGACGCGCA CCATGGACGA GGCAGCACTT
ATCAGGGCCA TGACGGCCCA GTTCCACAAG GTCTGCGATG GTCAACTCGC CGACGCTGCG
CGCCGCATCG GCATGACCCC CTTTCAGGTT GTAACCCTCG CCTCTCTCAT CGAGAAAGAG
GCTGTAGTTG CCACGGATCG CCCACTCATC TCGTCGGTCT TTCACAACCG GCTTGCCAAG
GGAATGCGCC TCCAGAGCGA CCCCACCGCC GTCTACGGCG TCAGGGCCTT CGCCAGCGCC
GTCACGAAGC AGGACATCGA GCGCCAAACG CCCTACAACA CCTATCTCAT TGCCGGGCTC
CCCCCCGGCC CCATCGGCAA TCCAAGCAAG GGAGCGATTG AGGCCGCCCT CAACCCGGTC
CGCACCCGCT ACCTGTACTT CGTATCAAAG AAAGACGGCA CCCATCACTT CTCCACCAGC
CTCGACGAGC ACAACGCCGC TGTCGCCACC TACCTGAAGA CGAACCGTGG CAACTGA
 
Protein sequence
MEESIPPKDT PGETGDQPPR RFVLKDRRIL AASALALLLL LVLPARYLFF LALPAGDGKT 
VRIVDFAKGE SVARIAADLE RDGIVSSARI FVIHTRLKGV SGKLQAGEYQ FSNGMRPGEI
LRMMLNGEVA VRRFAVPEGY SIHQLAELLE SQKLFSKEGF LKAATDPALL TELGIEGKSV
EGYLFPSTYD VTRTMDEAAL IRAMTAQFHK VCDGQLADAA RRIGMTPFQV VTLASLIEKE
AVVATDRPLI SSVFHNRLAK GMRLQSDPTA VYGVRAFASA VTKQDIERQT PYNTYLIAGL
PPGPIGNPSK GAIEAALNPV RTRYLYFVSK KDGTHHFSTS LDEHNAAVAT YLKTNRGN