| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3013 |
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| Symbol | |
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| ID | 3740750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3397598 |
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| End bp | 3399394 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780302 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_385953 |
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| Protein GI | 78224206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00684443 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.862296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAC GGATCAGGAA CATCGCCATC ATCGCCCACG TCGACCACGG CAAAACCACG
CTGGTCGACG CCATGCTGAA GCACGCGGGG GTCTTCCGCG AGAATGAGGC CATCACCGAG
CGGGTCATGG ACTCCAACGA CCTGGAGAAG GAGCGGGGGA TCACCATCCT CGCCAAGAAC
CTCTCGGTGC ACCATGGCCG CTACAAGATC AATATCATCG ACACCCCTGG CCACGCCGAC
TTCGGCGGCG AGGTGGAGCG GGTGCTCAAG ATGGTGGACT CGGTGCTCCT GCTGGTGGAT
GCCCTGGACG GCCCCATGCC CCAGACCCGT TTCGTGCTCA AGAAATCCCT CGATCTGGGC
CTGAAGCCCA TCGTAGTCAT CAACAAGATC GACCGCCCCG GTTCCCGTCC CGACGAAGTC
GTCGATATGG TCTTCGACCT CTTCTGTGAG CTGAACGCCA ACGACGAGCA GCTGGATTTC
CCCATCGTCT ACACCAGTGC CAAGCTCGGT TTCGCCAAAC TGGACCTCAC CTCCGACTCA
TCCAGCATGG AACCCCTCTT CGCCGTGGTG GAATCCAATG TCCGCCCCCC CTCCGGCGAT
GCCAAATTAC CGTTCCAGTT GCTGGTCACC AACATTGATT ACAACGAATA CATCGGCCGC
ATCGCCACGG GCAAGGTCTT CAACGGCAGC GTCAAGAGCG GCGAAACCGT GGCGCTGGTG
CGCCGCGACG GCAGCATCGT CAGGAGCCGC ATCTCGAAAC TCCTGGGCTA CGAGGGGCTC
AAGCAGGTAG AGGTTCCGGA AGCGTGCACC GGCGACATCG TCACCGTGGC CGGCTTTGAT
GAGGTGGGTA TCGGCGAAAC CCTGGCAGCC GCCGACAATC CCGTGGCCCT CCCCTACGTC
TCCATCGACG AGCCGACCAT CGCCATGAAT TTCATCGTCA ACTCCTCCCC CTTCGCCGGC
AAGGAGGGGA AATTCGTCAC CTCCCGCAAC ATCCGTGACC GCCTCGACAA GGAGTTGCGG
ACCAACGTGT CGCTGCGCGT CGAGGATACC GGGAACGCCG ACACCTTCAA GGTCTCGGGT
CGCGGCGAGC TCCACCTCTC CATCCTCATC GAGAACATGC GGCGCGAAGG GTTCGAGATG
GCGGTCTCCA AGCCCGAGGT CATCATGCGG GAGTTGGACG GCAAGAAGAT GGAGCCCATG
GAGTACCTGG TGGTGGACGT CCCCTCCGAG TTCCAGGGGT CCATCATCGA GAAGATGGGA
CCCCGCAAGG GTGAGATGAC CTCCATGCAG CCCATGGGGG AGACGGTGCG CCTTGAGTTC
ATCGTGCCGG CCCGGGGACT CATCGGCCTG CGGGGCGAGC TCCTCACCGA GACCCGGGGC
ACCGCGGTCA TGACCCACAC CTTCCACGAC TACGCCCCCT ACAAGGGCGA CATCCCGGGA
CGCAAGAACG GGGTCCTCAT CGCCATGGAG AACGGCGAGA CCACCGCCTA CTCCCTGGAC
GGCCTCCAGC CCCGGGGCAT CCTCTTCATC GGGGCAGGAG TCGAGGTCTA CGGTGGCATG
ATCATCGGCC AGCACGCCAA GGACAACGAC CTGGACGTGA ACCCCTGCAA GGGGAAGAAG
CTCACCAACG TCCGGGCCTC GGGCTCCGAC GACGCCATCA AGCTCACCCC GCCCCGCATC
CTGACCCTGG AGCAGGCCCT GGAGTTCATC GACGACGATG AGCTGGTGGA GGTAACCCCC
CAGTCGATCC GGCTCCGGAA GAAGGAGCTG GACCCGAACC GGCGCAAGCG CAAGTAA
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| Protein sequence | MQERIRNIAI IAHVDHGKTT LVDAMLKHAG VFRENEAITE RVMDSNDLEK ERGITILAKN
LSVHHGRYKI NIIDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG
LKPIVVINKI DRPGSRPDEV VDMVFDLFCE LNANDEQLDF PIVYTSAKLG FAKLDLTSDS
SSMEPLFAVV ESNVRPPSGD AKLPFQLLVT NIDYNEYIGR IATGKVFNGS VKSGETVALV
RRDGSIVRSR ISKLLGYEGL KQVEVPEACT GDIVTVAGFD EVGIGETLAA ADNPVALPYV
SIDEPTIAMN FIVNSSPFAG KEGKFVTSRN IRDRLDKELR TNVSLRVEDT GNADTFKVSG
RGELHLSILI ENMRREGFEM AVSKPEVIMR ELDGKKMEPM EYLVVDVPSE FQGSIIEKMG
PRKGEMTSMQ PMGETVRLEF IVPARGLIGL RGELLTETRG TAVMTHTFHD YAPYKGDIPG
RKNGVLIAME NGETTAYSLD GLQPRGILFI GAGVEVYGGM IIGQHAKDND LDVNPCKGKK
LTNVRASGSD DAIKLTPPRI LTLEQALEFI DDDELVEVTP QSIRLRKKEL DPNRRKRK
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