Gene Gmet_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3011 
Symbol 
ID3740748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3395722 
End bp3396585 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID637780300 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_385951 
Protein GI78224204 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000101253 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAT TCGGTTTCAT CGGCCTCGGC ATCATGGGAA GCGCCATGGC TAAGAACCTT 
GTGAAAGCGG GCTGTTCGGT GACGATCTGG AACCGTTCCC CGGAGAAGGC GGAGGAACTG
GCGGCCTTGG GGGCGGAACG GGCCGCAACC CCCTGCGAAG TGGTGGAGTC ATGCCCCGTG
ACCTTTGCCA TGCTGGCGGA CCCAGCTGCG GCGGAGGAGG TTTGCTTCGG CAAGCACGGG
GTGCTGGAGG GGATCGGCGA AGGGCGTGGC TACGTGGACA TGTCCACCGT GGACCCGGCC
ACATCCCAGC GGATCGGCGT GGCCGTGGTG GCCAAGGGGG GACGGTTCCT GGAGGCGCCC
GTGTCGGGGA GCAAAAAGCC GGCCGAGGAC GGCACCCTCA TCATCCTGGC AGCCGGGGAC
CGGAACCTCT ACGACGAGGC AATGCCCGGC TTCGAGAAGA TGGGGAAGAA GATCATCCAC
CTTGGTGACG TGGGAAAGGG CGCCGAGATG AAGCTGGTGG TGAACATGGT CATGGGTGGG
ATGATGGCCT GCTTCTGCGA GGGACTGGCG TTGGGGGAGA AGGCGGGGCT CGCCACCGAC
GCCATCCTCG ACGTGATCGG CGCCGGCGCC ATGGCGAATC CCATGTTCGC CCTGAAGGGG
GGGCTCATCC GCGACCGGAA CTTCGCGCCG GCCTTCCCCC TGAAGCATAT GCAGAAGGAT
CTGCGGCTGG CGGTTGCCCT GGGTGACCGG GTGGGTCAGC CCCTCGTGGC CTCCGCGGCG
GCCAACGAGC TGTTCAAGGG GGCCAGGGCC GCCGGCTTCG GCGACGAGGA TTTCTCCGCC
ATCTTCAAAA CCATCGAGCG GTGA
 
Protein sequence
MQKFGFIGLG IMGSAMAKNL VKAGCSVTIW NRSPEKAEEL AALGAERAAT PCEVVESCPV 
TFAMLADPAA AEEVCFGKHG VLEGIGEGRG YVDMSTVDPA TSQRIGVAVV AKGGRFLEAP
VSGSKKPAED GTLIILAAGD RNLYDEAMPG FEKMGKKIIH LGDVGKGAEM KLVVNMVMGG
MMACFCEGLA LGEKAGLATD AILDVIGAGA MANPMFALKG GLIRDRNFAP AFPLKHMQKD
LRLAVALGDR VGQPLVASAA ANELFKGARA AGFGDEDFSA IFKTIER