Gene Gmet_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3009 
Symbol 
ID3740746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3393087 
End bp3393944 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID637780298 
Producthypothetical protein 
Protein accessionYP_385949 
Protein GI78224202 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR02757] conserved hypothetical protein TIGR02757 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.17787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.91489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTTCA AAACAGTTCT CGACAATCTC TACGCCGCCC GCTCGACCCG GCACCTGGCA 
AACGACCCCC TCTCGTTCTG CCACCGCTTT GTGGCCCCCG AGGACCGGGA GATCGCGGGG
CTCGTGGCGT CGTGCCTCGC CTACGGCAAC GTGAAGATCA TCCTCCGGAA CCTGGAGACG
GTCTTCGCCG CCCTGGGGCC GTCGCCCCGG CGGTTCGTGG AGCGTTTCGA GCTGGAAGAA
GGTCTGCGGC TCTTCGCCGG GTTCAAGCAC CGCTTCAACG ACGGCCGCGA CCTCTGCGCG
CTGCTCCTGG CGGCCCGGAC CATGATCGAG GAAGCGGACA CCATCGGCGA CTTCTTCCTG
GGGTGCCACG ACCCCCATGC CGAGGACATT ACCTCCTCCC TCACGGAATT CAGCGCCGCC
ATCCTCGCCT TCGACTACGC CCCCGTCTTC GGCAGCGATG CCATCCCTGC CGATTCCTAC
TTCCCCTTCT TCTTCCCCTC CCCCGCCTCG GGGAGCGCCT GCAAGCGTCT CTGCATGTAC
CTGCGCTGGA TGGTCCGCCC CGCCGACGGC ATTGATCTGG GGGTCTGGAA GGGGGTTTCA
CCGGGCCAGC TGGTTATTCC CGTGGATGCC CACATCCGGC GGATCTGCCG CAGCCTGGGG
TTCACGAAGC GCAAGCAGGC CGACTGGCGC ATGGCCCGGG AGATCACGGC GGCGCTCCGG
CAGTTGGACC CGGCCGACCC GGTGAAGTAC GATTTTCCCC TCTGCCACCT GGGAATCTCG
GAGGGGTGCG ACGGCACGGT GCAGCCCCTC TGCCGCCAAT GCCCGGTGGT GGAGCTCTGT
GGGGCGGGTG CGCCATGA
 
Protein sequence
MDFKTVLDNL YAARSTRHLA NDPLSFCHRF VAPEDREIAG LVASCLAYGN VKIILRNLET 
VFAALGPSPR RFVERFELEE GLRLFAGFKH RFNDGRDLCA LLLAARTMIE EADTIGDFFL
GCHDPHAEDI TSSLTEFSAA ILAFDYAPVF GSDAIPADSY FPFFFPSPAS GSACKRLCMY
LRWMVRPADG IDLGVWKGVS PGQLVIPVDA HIRRICRSLG FTKRKQADWR MAREITAALR
QLDPADPVKY DFPLCHLGIS EGCDGTVQPL CRQCPVVELC GAGAP