Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3006 |
Symbol | |
ID | 3740995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3390705 |
End bp | 3391709 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780295 |
Product | integron integrase |
Protein accession | YP_385946 |
Protein GI | 78224199 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.976928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCCA TCAACATGGG CAAAAACGCC TCTGCTGTCG AACCCGAAAA ACCCCGCCTC CTGGATATCC TCCGCACCAG AATCCGCCTC AAACATTACA GCCTCCGCAC GGAGCAGACT TACACCGAAT GGGCGAAGCG CTACATTCTC TTCCATGGCA AACGCCATCC CGCCGAGATG GGGAAGGAAG AGGTGGAGGC GTTTCTCTCC CATCTGGCGG TGAAGCACAA TGTCTCGGCC TCGACCCAGA GCCAAGCCCG GGCCGCGATT CTTTTTCTCT ACCGCGAGGT ACTCGACATT GAACTCCCCT GGCTGGACGA TGTGGAACAG GCGAAGAAGC CCCAACGGCT GCCGGTGGTG CTGACGGTAA GCGAGGTGCA GGCTCTCCTC TCCCGCCTGA CCGGAACCCA TGCGCTGATG GGGCGACTGA TGTACGGTAC CGGCATGCGC CTGATGGAGA CGGTGCGGCT GCGGGTGAAG GATGTGGATT TCGAGCGGAG CGAGATCATC GTCCGGGAAG GTAAGGGTGC AAAGGATCGG ATCACCATGC TCCCCCAAGC GGTTGCGGCC CCGCTGCGGG AGCACCTGGG GCGGGTGGAG GCTCTTCACG GGGCGGATTT GAGGGCCGGC TTCGGCGAGG TCCACCTCCC CCATGCCCTC GGGAAGAAGT ACCCGAACGC GGGTCGGGAA TGGGGATGGC AGTATGTGTT CCCGGCAAAG CAGCTTTCGA CGGACCCGCG CACGGGGGTA ACCCGTCGGC ACCACGCTGA CGAGAAGGGA ATCCAGCGGG CCATCCGTCA GGCAGTGCGG GACGCGGAGC TTGCCAAGCC AGCCACTCCC CACACGCTAC GGCACTCCTT CGCGACGCAC CTGCTCCAGT CGGGCTACGA TATCCGCACG GTGCAGGAAC TTCTGGGCCA CAAGGATGTG CAGACGACGA TGATCTACAC CCATGTGCTG AACCGTGGCG GCAAAGGGGT GGAAAGTCCC CTTGATCGGC TGTAG
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Protein sequence | MHPINMGKNA SAVEPEKPRL LDILRTRIRL KHYSLRTEQT YTEWAKRYIL FHGKRHPAEM GKEEVEAFLS HLAVKHNVSA STQSQARAAI LFLYREVLDI ELPWLDDVEQ AKKPQRLPVV LTVSEVQALL SRLTGTHALM GRLMYGTGMR LMETVRLRVK DVDFERSEII VREGKGAKDR ITMLPQAVAA PLREHLGRVE ALHGADLRAG FGEVHLPHAL GKKYPNAGRE WGWQYVFPAK QLSTDPRTGV TRRHHADEKG IQRAIRQAVR DAELAKPATP HTLRHSFATH LLQSGYDIRT VQELLGHKDV QTTMIYTHVL NRGGKGVESP LDRL
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