| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2998 |
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| Symbol | |
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| ID | 3740987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3382094 |
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| End bp | 3384517 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637780287 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_385938 |
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| Protein GI | 78224191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.745142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACG ATATGAGAAA CGACGTCAAA TCACTCCGTG CGGGCATATT CTCAGAAATC
ATCATCGTCT TCCTCCCCCT GACGATGCTG CTCATCTATC AGACCGTCAG CGACATCACC
GTCTCCGACA GGCTTGCCGA CACCCATCGG CTCCTTGCCG CCTCGTCGTC GGCCTACCAG
AGATACAGAC TGTTCGTCAA CGGCGTCGTT GATGCGATCG ATACCGGCAG AGTCTCCGAG
GATGCCGTCC ACAACCTCGA ACATACAACC GTTGAACTCA AGTCCATCAC CACCGGGGAC
CGCAGCAGTG ATTTCAGTTC CCTGGCGGCC AGGACAAACG CCCTGCTCGC GCACCTGAGG
AAAGACCGCT CCTTCGGGAA GGTACTGCCG CTGCGGGATA CCATCAATGG GATCGATGCG
GACCTGTCGG CGCTTGCCGC ACAATGCGAC GAAACAAATC GACAAATGAT CCTGGAGAAC
ATCAATTCCA CCCAGTCCAG AAAGATCATG GTGTTCACGG CCCTGGCACT GGGAGCACTC
GTCACACTTG CCCTGATTGT CATGCTTATT CGGCATGTTA CCCGGTTCGA GCTGGTCTTG
CGGGAGAGCG AAGAGCGAAT GCGGGTAATG TTCGAGTCGA TCAACGCCGG CATTGTGCTC
ATCGATTGCG ATAACAACAG CATCGTGGAT GTCAATCCGA CTGCGCTTCG CCTGCACGGG
GGAACAAAGG AGGAATTGAT AGGGTATCCG AGTGAGCGTC TCTTCCATGG GGACAATGTG
CGGACAGATC CGGAGCATGA CGAGGGGAAG GCAATCGACA TATCCAAGGG GATGTTGAGC
CTGTGCAATG GCGAACGCCT TCCCGTCCTT GAATCGGTCA ACTACGTGGC CATAAACGGT
CGCCGGTATA TGCTGAAAAG CTTTGTCGAC CTGTCGAAAC AGATGACCCT GGAAACCGAG
CTCCTTGCCG CCAAGGAGGC TGCCGAGGCG GCCAGCAGGG CCAAAAGCAT ATTTCTCGCC
AGCATGAGCC ATGAAATCCG GACTCCCATG AACGCTATCA TCGGCTATGC GCAACTGCTG
AAGCGAGAAG GCAATCTTGC GCCACAACAG GGACAATACC TCAATGTCAT CAACAACAGC
GGAGAGCATC TCCTCAAGCT GATCAACGAC ATTCTCGAAA TGTCGAAAAT CGAGTCCGGC
ACGGTCAACC TCACGCCGGT TCCCTTCAAT TTTCACAATC TGCTGCACGA CGTGGAATCC
CTGTTCGCCG ACCGGGCCAG GCAGAAGAAG CTGCGGTTCG ACGTCCGGTT GCAGGGCGAG
GTACCCGTGG TGCTGGATGC GGATGAGATG AAAGTGCGCC AGGTCCTCAT CAACATGATC
GGCAACGCGC TCAAATTCAC CGACGAGGGG ACGATTGCCG TCACGGTTTC CTCCTCGACC
GACAGCCCGG ACAAAGAACG TGACACGTAC GGCGAAACGG CCATAACCGT CGATGTCGAA
GACTCGGGAA TCGGAATCTC TGCCGAGGAG GCAGACCAAG TCTTTGCCCT GTTCGAGCAG
ACCGAAAGCG GCCGACGCAG GATAGGAGGA ACGGGACTCG GCATGCCAAT CAGCCGCCAG
TTCGCCCGAC TGATGGGAGG AGACCTGTTT CTTGTGCGCG GCGAGCCCGG CATCGGCTCG
GCATTCCGTT TTGTCTTCAG GGCAAAGGCG CTGGACCTGG CGGAATTCAA GCAGCCGGCA
GTCGATGAGC GGTTCTTCTG GCGGATTATC CCGGACGAAA AAGAATGGCG CGTCCTGGTC
GTCGATGACC AGGAGAACAA CCGGAGCCTT TTGTCGCACA TGCTCACCAG GGCCGGCTTT
GCGGTTCGCG AGGCGGACGG CGGCATTGAC GGCGTCGCCC AGTTTCGCGC CTGGCTTCCC
GATATCGTTC TGATGGATAT CCTGATGCCG GATATGGACG GCTATGAGGC CCTGCGGCAG
ATAAAGGCAA CCTCAGAGGG GGGCGTTACC CCCGTAATCG CCGTTACCGC CAGCGTCATG
ATGGATGAAC ATCAGAAGGC CCTCGATCTT GGATTTGACG GTTTCATCAT GAAGCCGGTT
TCCATGGAGT GCCTCTTCGA GGAAATCCGG CGTCTCACCA ACGTGGCCTA TCTGTACGAT
GACAGCAGGT CCTCCGGGGA TGCGGCCGCG GAGATCCTTC CCCCCTGGGT TGACAGGCTG
ACCACGCTGC CGGACGTTCT CCTGGGGGCC ATGCGTGATG CGCTTGAGGC GGGAGACATT
GCTTCACTTC GGGGGCTCAT CGAGCAGATA GGCGAGTCCG AACCGATACC GGCCGAAGCG
TTACGCCGCC TTGTCGATTC TTATTCCTAC GACGAACTGA CCACACTGCT TGCAGGGGGG
GACGCCAGAT ATGCCAGCGC TTGA
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| Protein sequence | MGNDMRNDVK SLRAGIFSEI IIVFLPLTML LIYQTVSDIT VSDRLADTHR LLAASSSAYQ
RYRLFVNGVV DAIDTGRVSE DAVHNLEHTT VELKSITTGD RSSDFSSLAA RTNALLAHLR
KDRSFGKVLP LRDTINGIDA DLSALAAQCD ETNRQMILEN INSTQSRKIM VFTALALGAL
VTLALIVMLI RHVTRFELVL RESEERMRVM FESINAGIVL IDCDNNSIVD VNPTALRLHG
GTKEELIGYP SERLFHGDNV RTDPEHDEGK AIDISKGMLS LCNGERLPVL ESVNYVAING
RRYMLKSFVD LSKQMTLETE LLAAKEAAEA ASRAKSIFLA SMSHEIRTPM NAIIGYAQLL
KREGNLAPQQ GQYLNVINNS GEHLLKLIND ILEMSKIESG TVNLTPVPFN FHNLLHDVES
LFADRARQKK LRFDVRLQGE VPVVLDADEM KVRQVLINMI GNALKFTDEG TIAVTVSSST
DSPDKERDTY GETAITVDVE DSGIGISAEE ADQVFALFEQ TESGRRRIGG TGLGMPISRQ
FARLMGGDLF LVRGEPGIGS AFRFVFRAKA LDLAEFKQPA VDERFFWRII PDEKEWRVLV
VDDQENNRSL LSHMLTRAGF AVREADGGID GVAQFRAWLP DIVLMDILMP DMDGYEALRQ
IKATSEGGVT PVIAVTASVM MDEHQKALDL GFDGFIMKPV SMECLFEEIR RLTNVAYLYD
DSRSSGDAAA EILPPWVDRL TTLPDVLLGA MRDALEAGDI ASLRGLIEQI GESEPIPAEA
LRRLVDSYSY DELTTLLAGG DARYASA
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