| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2986 |
|---|
| Symbol | |
|---|
| ID | 3740897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3373130 |
|---|
| End bp | 3373573 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637780275 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_385926 |
|---|
| Protein GI | 78224179 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.00130326 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.964264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG TCAAGTACAC CCCGTTTGGG GACCTCAGGA ATCTGCAGGA GCAGATGAAC
CGGCTTCTGG ACATGGCGTG GAGCAGGGAG AGCGGCGAAG AACTCCGCGA AGGGGTATGG
CAGCCGCCGG TGGACATCTT CGAGGATGAA AACGGCGTCG TCATCAAGGC CGAACTCCCC
GGCATCGACC AGAAGGACAT CGAGGTAAAA ATCGAGGACA ACACCCTCAC CATCCGGGGC
GAGCGCAAGC ACGACCAGGA AGTGAAGAAG GAGAACTACC ATCGGGTTGA GCGGTACTAC
GGCTCCTTCA TGCGGAGCTT CTCGCTCCCC ACCACCATCG ACCGCGATAC CGTCAAGGCG
GTCTGCGACA AGGGAATCCT GACTATAACC CTTCCCCGGC GCGAGGAAAC CAAGCCGAAG
CAGATCAACG TGGAAGTGAA ATAA
|
|---|
| Protein sequence | MAIVKYTPFG DLRNLQEQMN RLLDMAWSRE SGEELREGVW QPPVDIFEDE NGVVIKAELP
GIDQKDIEVK IEDNTLTIRG ERKHDQEVKK ENYHRVERYY GSFMRSFSLP TTIDRDTVKA
VCDKGILTIT LPRREETKPK QINVEVK
|
|---|
| |