| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2983 |
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| Symbol | |
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| ID | 3740894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3369686 |
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| End bp | 3372364 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780272 |
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| Product | DNA polymerase I |
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| Protein accession | YP_385923 |
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| Protein GI | 78224176 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGA AACAGACCCT CTACCTCATC GACGGCTCCT CCTATATCTA CCGGGCCTAC
TACGCCATCC GGCACCTCTC GTCCCCCAAG GGGTTCCCCA CTAACGCCCT CTACGGTTTC
ACCCAGATGC TCCTCAAGGT CATCAAGGAC CGCCGCCCCG ACCATATCGC CGTGGTCTTC
GACGTGGGGC GCACTACCTT TCGCACCGAC CTCTACCCCG ACTACAAGGC CAACCGCTCC
GCCATGCCCG ACGATCTCGT CCCCCAGATC GCCCCCATCA AGGAGATGGT CCGGGCCTTC
AATATCCCGG TGCTGGAGCT GGCGGGGTAC GAGGCCGACG ACATCATCGG CACCATCGCC
CGGGAGTGCG AGGAGCGTGG GATGGAGGCG GTGGTGGTCA CCGGCGACAA GGACCTGATG
CAGATCGTGA GCGAGCGGGT CACGCTCCTC GACACCATGA AGGAGAAGGC CTCGGGCATC
CCCGACGTGC AGGAGCGGTT CGGCGTCGGG CCGGAAGGGG TGATCGACAT CCTCGGCCTC
GCCGGTGACA CCTCCGACAA CATCCCCGGC GTTCCCGGCA TCGGCGAGAA GACCGCCATC
AAACTGATCC AGGAGTTCGG CTCCCTGGAC ACGCTTCTGG AGCGGGCTGG CGAGGTGAAA
GGAAAGACCG GGGAGAAGCT CCGGGAGTTT GCCGACCAGG CCCGCCTCTC CCGGCAGTTG
GCCACCATCG TGCGGGACGT GCCGATGGCG TTTGATTTTG CCGCCTTTGC CGCCTCTTCC
CCCGACAACC GGCGTCTGGC CGAGCTCATC AAGGAGTACG GCTTCACCAC CCTCATGAAG
GAGCTGACCA GCGAGGCGAC CCTCTCCACC GAGCAGTACC GGACCGTCGC CACCGAGGAG
GAATTTGAGG CGCTTCTTGC AGATTTGAAA GCCGCCGGCA CCTTTGCCGT GGACCTGGAG
ACCACGAGCC TGAACCCCCT GGAGGCGGAG ATCGTCGGCA TTTCACTCAG CTACCGGGAC
CACGAGGCGT GCTACATCCC GGTGGGGCAC TTCTATCTGG GGGCGCCGGA GCAGCTCCCC
CGCCGGCGGG TGCTGGACGC CCTGACGCCC CTCCTCATCG ACCCGAAAAT CCGCAAGGTG
GGGCAGAACC TGAAGTACGA CTACCAGGTC TTCCGGCGCC ACGGCATCGA GCTTGGCGGG
GTCTGGTGCG ACACCATGGT GGCCTCCTAC CTCCTGAACC CGGTCCGCTC CGGCCACGGC
CTCGACTCCC TGGCCGTGGA GCATCTGGAT CACAAGATGA TCTCCTACGA GGAGGTGGCG
GGAAAGGGGA AGGAGCAGGT GAACTTCGCC CAGGTGCCGG TGGAGAAAGC CTCCACCTAT
TCCTGCGAGG ACTCGGACGC CGCGTGGCTC CTCCACCGTC TCTTCCTCCC CCGGGTGGCG
GTGTGGGGGA TGGAGCGGCT CTTTTTTGAT GTGGAGATGC CCCTGGTGCC GATCCTGGCC
GAGATGGAGC TGGCCGGGGT AAAGCTGGAC CTCCCCCTTC TCGGGGAACT ATCCGCCGGT
TTCGGGAAAC AGCTGGCGGA ACTGGAGGGG CGGATCACGG GGCTCGCTCC GGAGCCCTTC
AATCTCAACT CCCCCAAGCA GCTCGGGGAG GTGCTCTTCG AGAAGCTGAA GCTCCCCACC
GGTAAGAAGA CCAAGACCAA GACCGGTTGG TCCACCAACG TGGAGGAACT GGAGCGGCTG
GCCGAGGCCG GCCACGAGAT CGCGGCCCTC ATCCTCCAGT ACCGGGGGCT CGCCAAACTC
AAATCCACCT ATACCGACGC CCTCCCCAAG CTGGTGCAGC CAGCCACGGG AAGGGTCCAT
ACCTCCTACA ACCAGACCGT CACCAACACG GGGCGGCTCT CCTCGTCGGA GCCGAACCTG
CAGAACATCC CGGTCCGGAC CGAGGAGGGG CGACGGATCC GCCGGGCTTT CATCGCCGAG
GAGGGGCACC TGCTCCTCTC CGCCGACTAC TCCCAGATCG AGCTCCGGGT CCTGGCCCAT
TTCTCGGAGG ACCGGGTCTT CTGTGACGCC TTTGCCAAAG ACGAGGACAT CCACACCCGC
ACCGCCGCCG AGGTCTTCGG CCTCTTCCCC GAGATGGTGA CCCCCGAGAT GCGGCGCCAG
GCCAAGGCCA TCAACTTCGG GGTCATCTAC GGCCAGGGGG CCTTCAGTCT CGCCAAGCAG
CTCGGCATCG CAACAAAAGT GGCCAGGGAG TTCATCGACA ACTACTTCGC CCGCCATCCC
GGTGCCCGGG CGTTCCTGGA CGGCTGCGTG CGGGAGGCGG AGGAGAAGGG GCATGTGACC
ACGCTCCTTG GGCGCAGGCT CCCGATTCCC GACATCAAGA GCGCCAACGG TAACATCCGG
GCCTTTGCCC AGCGCAACGC CGTCAACTAC CCCATCCAGG GGTCCGCCGC CGACATCATC
AAGGAGGCCA TGGTGAAGGT GACGGCCCGG ATGCGGCGCG ACGTCGTGGG GAGCCGGCTC
ATCATGCAGG TCCACGACGA ACTCGTCTTC GAGGTGCCCA AGGGCGAGGT GGTTGCCATG
GAACAGCTCG TGCGGCGCGA GATGGAGCAC GCCGTGAGCC TGCGCGTGCC GCTTAAAGTG
GATATAAACC ACGGCGGGAA CTGGAGCGAG GCCCACTAG
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| Protein sequence | MTGKQTLYLI DGSSYIYRAY YAIRHLSSPK GFPTNALYGF TQMLLKVIKD RRPDHIAVVF
DVGRTTFRTD LYPDYKANRS AMPDDLVPQI APIKEMVRAF NIPVLELAGY EADDIIGTIA
RECEERGMEA VVVTGDKDLM QIVSERVTLL DTMKEKASGI PDVQERFGVG PEGVIDILGL
AGDTSDNIPG VPGIGEKTAI KLIQEFGSLD TLLERAGEVK GKTGEKLREF ADQARLSRQL
ATIVRDVPMA FDFAAFAASS PDNRRLAELI KEYGFTTLMK ELTSEATLST EQYRTVATEE
EFEALLADLK AAGTFAVDLE TTSLNPLEAE IVGISLSYRD HEACYIPVGH FYLGAPEQLP
RRRVLDALTP LLIDPKIRKV GQNLKYDYQV FRRHGIELGG VWCDTMVASY LLNPVRSGHG
LDSLAVEHLD HKMISYEEVA GKGKEQVNFA QVPVEKASTY SCEDSDAAWL LHRLFLPRVA
VWGMERLFFD VEMPLVPILA EMELAGVKLD LPLLGELSAG FGKQLAELEG RITGLAPEPF
NLNSPKQLGE VLFEKLKLPT GKKTKTKTGW STNVEELERL AEAGHEIAAL ILQYRGLAKL
KSTYTDALPK LVQPATGRVH TSYNQTVTNT GRLSSSEPNL QNIPVRTEEG RRIRRAFIAE
EGHLLLSADY SQIELRVLAH FSEDRVFCDA FAKDEDIHTR TAAEVFGLFP EMVTPEMRRQ
AKAINFGVIY GQGAFSLAKQ LGIATKVARE FIDNYFARHP GARAFLDGCV REAEEKGHVT
TLLGRRLPIP DIKSANGNIR AFAQRNAVNY PIQGSAADII KEAMVKVTAR MRRDVVGSRL
IMQVHDELVF EVPKGEVVAM EQLVRREMEH AVSLRVPLKV DINHGGNWSE AH
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